Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0022 ATGCCTTCTGTCACCTGGGGTGTGATTCAAGGACGGAAAGAGAAGCTTGTTTCGCGGGTAATCATCTTTGATTatcttaagggtttagggatcatTCCTGACGAATTGGGGGACTTGGAGCTGCCTTCCACCGTTGAGGTCATGAGGGAGCGTGTTGAGTTTCTTCAGAAGTTGGGATTAACGACTGATGACATTAATGAGTACCCTTTGATGCTGGGATGCAGTGTGCGAAAGAATATGATACCTGTTTTGGGATACTTGGAAAAAATTGGGATTCCAAGATCAAAACTCGGTGAATTCATTAAAAGCTACCCACAAGTCTTACATGCAAGTGTGATTGTTGAGCTTGCGCCAGTTGTTAAGTTACTCCGAGGCCTTGATGTGGAGAGACAGGATATTGGGTTTGTGTTGCAAAAGTATCCTGAGCTTCTGGGCTTCAAGCTTGAGGGCACTATGAGTACTTCCGTGGCTTATCTTGTAAGCATTGGTGTCAATCCCAGAGATATCGGTCCCATGGTAACACAGTATCCTTATTTTTTGGGAATGAGAGTTGGGACTATGATTAAACCTCTAATAGACTACTTAGTCTCTTTGGGGCTGCCCACGAAAATTGTAGCTAGGATGTTGGAGAAGCGACCCTATTTACTTGGTTATGATCTTGAGGAATCTGTTAAACCTAATGTGGATTGTTTGATTAGTTTTGGAATTGGGAAGGAGTCGCTGCCTTCACTTATTGCTCAATATCCACAGATTCTTGGGCTGCCTCTCAAGGCTAAATTGTCTTCGCAGCAATATTTCTTTAGTTTAAAGCTTAAGATTGATCCTGACGGGTTTGCGGCAATCCCATCACACGATGTGGCTAATATGGTGATCAAATGTCCTCAGTTATTAGCATTGAGAGTTGAGCTCATGAAGAACAGTTATTACTTCTTCAAGAGTGAAATGGGGAGGCCCATAAAAGAGCTTGTGGAGTTCCCTGAATACTTTACTTATAGCTTGGAATCCAGGATTAAACCCAGATATCAGAGGTTAAAGAGCAAGGGGATACGATATTCACTAAATTGGATGCTAAATTGTAGTGACCAGAGATTTGAAGAGAGATTGCAGGGTAATTACATTGAAACTGAAAGTATAGGTCCATCATTCTGTATGGGTGGGAAGCTAGAGCTACCTGGGAATGAGATTGTGTCAGATGAGGAAGAGGAAAGTGATGACGAAGTACTATATAGACGAACTGTTACTCTTTAG 1248 0.4159 MPSVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELGDLELPSTVEVMRERVEFLQKLGLTTDDINEYPLMLGCSVRKNMIPVLGYLEKIGIPRSKLGEFIKSYPQVLHASVIVELAPVVKLLRGLDVERQDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLIDYLVSLGLPTKIVARMLEKRPYLLGYDLEESVKPNVDCLISFGIGKESLPSLIAQYPQILGLPLKAKLSSQQYFFSLKLKIDPDGFAAIPSHDVANMVIKCPQLLALRVELMKNSYYFFKSEMGRPIKELVEFPEYFTYSLESRIKPRYQRLKSKGIRYSLNWMLNCSDQRFEERLQGNYIETESIGPSFCMGGKLELPGNEIVSDEEEESDDEVLYRRTVTL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0022 415 Gene3D Transcription termination factor 3, mitochondrial 21 113 IPR038538 -
Sto7g0022 415 Gene3D Transcription termination factor 3, mitochondrial 155 375 IPR038538 -
Sto7g0022 415 PANTHER EXPRESSED PROTEIN 276 398 - -
Sto7g0022 415 PANTHER EXPRESSED PROTEIN 2 272 - -
Sto7g0022 415 SMART mt_12 319 350 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 242 274 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 Pfam mTERF 84 281 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 Pfam mTERF 283 365 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 PANTHER CGI-12 PROTEIN-RELATED 2 272 IPR003690 GO:0003690|GO:0006355
Sto7g0022 415 PANTHER CGI-12 PROTEIN-RELATED 276 398 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0022 Sto-Chr7 275579 276907 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto7g0022 mTERF 1.9e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0022 K15032 - gmx:100809590 719.539