Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0018 ATGGCCGCCACTACAACCACCACAACCGCTGCGCCTCCTCGCCAGCTATCGCAGAAGGAGGCTGATATCCAGATGATGTTGGCCGCCGAGGTTCACCTTGGGaccaaaaattgtaattttcaaATGGAGCGATATGTCTTCAAGCGCCGCAATGATGGTATTTACATAATCAACCTTGGCAAGACATGGGAGAAGCTTCAGCTTGCTGCCAGGGTTATTGTTGCTATAGAGAACCCTCAGGATATTATAGTTCAGTCTGCCCGGCCTTATGGTCAGAGGGCAGTACTTAAGTTTGCTCAATACACAGGTGCCCATGCCCTTGCTGGACGACATACTCCAGGAACATTCACTAACCAGCTCCAGACATCTTATAGCGAGCCCCGCCTTCTCATTCTAACTGACCCAAGAACTGATCACCAGCCCATTAAGGAAGCTGCACTTGGAAACATACCAACTATTGCCTTTTGTGACACTGATTCTCCTATGCGGTATGTTGACATCGGCATTCCTGCCAATAACAAGGGGAAGCACAGCATAGGTTGTCTCTTTTGGCTCTTAGCAAGGATGGTACTGCAGATGCGGGGCACTATTCGTCCTGGGCTTAAGTGGGATGTGATGGTGGATTTGTTCTTCTACAGAGAACCTGAGGAAACCAAACAACAAGAGGAAGATGAAGCACCTGTTGCCCCAGACTATGCTATTACAGACTTCAATGCTGCTAGCATTGCCGCTGATGGCCAGTGGCCTGCTGCCATTGATCAGTCCTGGACTGATGCAGTTCCACAGCCTATTCCAGCAGTTCCTGGTGTCAGTTGGTCTGCAGATGCTGGAGGAGATTGGGGTGAATCTGTTCCAGCTCCGGCAGTTCCTGCCCCACAGATACCTGCCCCCGGAATTGATGCTGTGCCTGCCACTGGCTGGGATTAA 927 0.4995 MAATTTTTTAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEETKQQEEDEAPVAPDYAITDFNAASIAADGQWPAAIDQSWTDAVPQPIPAVPGVSWSADAGGDWGESVPAPAVPAPQIPAPGIDAVPATGWD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0018 308 MobiDBLite consensus disorder prediction 268 308 - -
Sto7g0018 308 SUPERFAMILY Ribosomal protein S2 18 208 IPR023591 -
Sto7g0018 308 CDD RPS2 26 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 Gene3D - 22 227 - -
Sto7g0018 308 Hamap 40S ribosomal protein SA [rps-0]. 10 251 IPR027498 GO:0003735|GO:0006412|GO:0015935
Sto7g0018 308 PANTHER 40S RIBOSOMAL PROTEIN SA 15 308 - -
Sto7g0018 308 Pfam Ribosomal protein S2 124 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 Pfam Ribosomal protein S2 26 121 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 214 IPR005707 GO:0003735|GO:0006412|GO:0015935
Sto7g0018 308 PANTHER 40S RIBOSOMAL PROTEIN SA 15 308 IPR005707 GO:0003735|GO:0006412|GO:0015935
Sto7g0018 308 ProSitePatterns Ribosomal protein S2 signature 1. 23 34 IPR018130 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 ProSitePatterns Ribosomal protein S2 signature 2. 127 151 IPR018130 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 PRINTS Ribosomal protein S2 signature 23 41 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 PRINTS Ribosomal protein S2 signature 53 62 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 PRINTS Ribosomal protein S2 signature 102 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 PRINTS Ribosomal protein S2 signature 127 144 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 PRINTS Ribosomal protein S2 signature 144 155 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto7g0018 308 PRINTS Ribosomal protein S2 signature 165 179 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0018 Sto-Chr7 251380 253755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0018 1 286 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 73.958 6.42e-153 427