Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0006 ATGGGAAACGCTCCTGATATTGGGGATGCTATACTTGCCAGTCCACAGGTAAGGAAGATCACATTTACTGGCTCAACAGCAGTTGGAAAGAAGTTGATGGCAGGTGCTGCTGGAACAGTTAAAAAAGTATCTCTGGAACTTGGTGGCAATGCACCTTGCATAATATTTGACGATGCTGATCTTGATGTGGCAGTAAAAGGAACAATTGCAGCAAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCAAATCGAATTCTTGTCCAAGAAGGTATCTATGAGAAATTTGCAAATGCTATCCTTGATGCTGTTAAGAATATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGGTTCAGGGACCTCTTATCAATGAAGCTGCTGTGAAAAAGGTTGAGTCCTTACTTCAAGATGCTACTTCAAAGGGAGCAAAAGTAATTCATGGGGGTAAAAGACATAGCCTCGGATTAACCTTTTATGAACCAACCGTCATCACTGATGTCAACAATGAGATGCTTATATCAAGAAATCTTATGCATTTCCTAGTGTTCAGTAATTTGAAAGCTGATGAAAAAGAGGAAGTGTTTGGACCTGTTGCTCCCCTTATGAAATTTAAAACTGAAGAGGAGGCTATCACCATTGCTAATGACACTAATGCAGGACTGGGTTCCTATATATTTACAAACAATGTTCAACGCTCATGGCGTGTTGCTGAGGCTCTTGAATATGGACTTGTGGGTGTCAATGAGGGAGTAATTTCGACAGAGGTGGCTCCATTTGGTGGTGTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGAATGGATGAATATTTAGAGCTGAGTTCCTAA 855 0.4105 MGNAPDIGDAILASPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIIFDDADLDVAVKGTIAAKFRNSGQTCVCANRILVQEGIYEKFANAILDAVKNMKVGDGFSEGVVQGPLINEAAVKKVESLLQDATSKGAKVIHGGKRHSLGLTFYEPTVITDVNNEMLISRNLMHFLVFSNLKADEKEEVFGPVAPLMKFKTEEEAITIANDTNAGLGSYIFTNNVQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLELSS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0006 284 SUPERFAMILY ALDH-like 2 282 IPR016161 GO:0016491
Sto7g0006 284 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 279 IPR016162 GO:0016491
Sto7g0006 284 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 2 282 - -
Sto7g0006 284 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 2 282 - -
Sto7g0006 284 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 73 84 IPR016160 GO:0016491
Sto7g0006 284 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 45 52 IPR029510 GO:0016491
Sto7g0006 284 Pfam Aldehyde dehydrogenase family 2 282 IPR015590 GO:0016491
Sto7g0006 284 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 49 254 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0006 Sto-Chr7 74613 80941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0006 1 282 Aldehyde Dehydrogenase Gene Family AT1G79440 76.596 1.39e-156 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0006 K17761 - gmx:100793318 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0006 7 74613 80941 Sto7g0006 7 74613 80941 ECH