Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0001 ATGGGTAAGTACTCAGATGCTCATATTTGCCAATGCTTGAGTCGCCTGTTAATTAGCCGATCAAATTTTCCGGTGACTATTGCCGGAGACTGCTGCAAAACCGGAGAACAGTTTGTGCAGGAAGTTGTGGGCCTGGCTTATGGGCTACAACAACTTGGAATCGGAGCTGGTGACGTTGTCGCCATCTCTGCTTACAACAGTGATTTGTACCTGAAGTGGTTATTAGCTATTGCATTTGTTGGGGGAATATCTTCTCCTCTAAACTATCGATGGaGCTTTGAAGAGGCAAAATTTGCAATTACCACAGTGAGGCCAGTGATGTTGGTGACTGATGAAAGCTGTTACACATGGTTCTTAAACCTCCAGAAAAATGATATTCCATCTGTGAGGTGGCATGTCTTTTTGGGTTCCCCTTCCTCGGATTTTAGTAAGAAGTGGAATGTAGTAACTTCAGAAATGCTAAAGAGGCATCTCGTAAAGCTTCCACCATTTGATTACTCCTGGGCACCTGAAGGCACTGCCATATTATGCTTTACATCAGGAACTATGGGAAAACCTAAGGGAGTCACCCTAAGCCATGGAGCTTTGATCGTACAATCCCTAGCAAAGATTGCTATTGTTGGCTACAGTGAGGATGATATTTATCTGCATACTGCTCCATTGTGCCATATTGGTGGATTGTCATCAGCGATGGCCATGCTAATGGTTGGTGGTTGCCATGTCTTGATGCCAAAGTTTGATGCCAAATCAGCTGTTGATGCCATAGAGAAATATACTGTGACATCCCTAATCACAGTTCCTGCAATAATGGCTGATATGGTTTCTTCAATTAGGGACAGGGAGATCTGGAGAGGGGGAGAATCTGTCAAGAAAATACTAAATGGAGGTGGGAACCTCTCAATCGAGCTCATCAGGAACTCCAGGATGACTGAGACTTGCTCTTCCCTAACATTCCTGACTCTCTATAAACCTACTCAAGAAGCCACCGGCCAATCCTTTATGATGGTTTCCAAGACAAGATCCAATATCATTCACCACCCACAAGGTGTTTGTGTTGGCAAGGCTGCTCCTCATGTAGAACTGAAAATTTGTGCAGATGGCTCTGGTCATGTTGGGAGAATTTTAACCAGAGGACCACATGTAATGCTCAGGTATTGGGATCAAATTCTGACAAATCCGTTAGATCCTAGGAATGAAGTATGGCTTGACACAGGTGACATTGGATCAATTGATCACGATGGTAATTTATGGCTTCTTGGACGAACAAATGGTCGGATCAAGAGTGGTGGAGAAAACATTTATCCTGAAGAGGTTGAAGCAATTCTATTGGAACATCCTGGAGTTGCTGGTGTCGTAACTGTGGGAATCCCTGATGCTCGTCTGACAGAGATGGTAGTTGCATGTATCCAACCAAGAAAAGATTGGCAATGGTCAGAGCAGTCTGTTTGGAAAGATAATCACCTATTTAGAGAGCACCTTCAGCAATATTGTAAGGATAAGAATTTGAGCAGGTTTAAAATAccgaaaatatttattttatggagGAAGCCTTTTCCACTCACAACTACCGGTAAAATAAGAAGAGACCAACTCCGAAAGGAACTTGCGTATCAACTACAATCTTGTAGTAACATTTGA 1638 0.4261 MGKYSDAHICQCLSRLLISRSNFPVTIAGDCCKTGEQFVQEVVGLAYGLQQLGIGAGDVVAISAYNSDLYLKWLLAIAFVGGISSPLNYRWSFEEAKFAITTVRPVMLVTDESCYTWFLNLQKNDIPSVRWHVFLGSPSSDFSKKWNVVTSEMLKRHLVKLPPFDYSWAPEGTAILCFTSGTMGKPKGVTLSHGALIVQSLAKIAIVGYSEDDIYLHTAPLCHIGGLSSAMAMLMVGGCHVLMPKFDAKSAVDAIEKYTVTSLITVPAIMADMVSSIRDREIWRGGESVKKILNGGGNLSIELIRNSRMTETCSSLTFLTLYKPTQEATGQSFMMVSKTRSNIIHHPQGVCVGKAAPHVELKICADGSGHVGRILTRGPHVMLRYWDQILTNPLDPRNEVWLDTGDIGSIDHDGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGVAGVVTVGIPDARLTEMVVACIQPRKDWQWSEQSVWKDNHLFREHLQQYCKDKNLSRFKIPKIFILWRKPFPLTTTGKIRRDQLRKELAYQLQSCSNI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0001 545 Pfam AMP-binding enzyme 34 428 IPR000873 -
Sto7g0001 545 Pfam AMP-binding enzyme C-terminal domain 437 525 IPR025110 -
Sto7g0001 545 SUPERFAMILY Acetyl-CoA synthetase-like 8 537 - -
Sto7g0001 545 Gene3D - 3 421 IPR042099 -
Sto7g0001 545 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 7 534 - -
Sto7g0001 545 PANTHER ACYL-COA SYNTHETASE 7 534 - -
Sto7g0001 545 CDD AFD_class_I 173 527 - -
Sto7g0001 545 Gene3D - 424 538 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0001 Sto-Chr7 3019 9175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0001 13 541 Monolignol Biosynthesis Gene Families AT4G05160 26.502 2.61e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0001 K14760 - gmx:100809925 802.742