Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4388 ATGAGCGAATGGGATAGGGCTGTAGCATCATCCTCGTCTTCTTCCAGATCGACTCTCAGAATGGGTTCCAATCCCAATCGCAACCTCGCCAGCCGCGTACCTTCAAATCGAACTGTTCGACTCGGCCGAGTCCAGCCCCAAGCCCCCGGTCACCGCACCGTTTTCTGCAACGATCGCGAAGCCAATCTCCCCGTCCGCTTCAAGGGGGAAAATGAACAAGAAGCTTGGAATCGTCCCGTGTCTCCAATAACTAATGTGGCTCCTCTATCACTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGATTTGGCCGTAAACAATAATATGATAGACGTTTTGCAAGATCAAAAGTGGGAGTCGATACCCTGGAAAAGGTTGCAGGTTGGAGACATTGTTCGGGTTAAGCAGGATGGGTTCTTTCCTGCTGATCTTCTTTTCCTAGCCAGTACAAATCCAGATGGTGTCTGCTACATCGagACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGATAAGGCGTCTGAGTTTAAagGTGAAATTCAATGTGAACaaccaaacaattcattgtataCCTTCACTGGAAATCTTATAATTCAAAAGCAAACACTTCCTCTCAGTCCAAACCAACTTTTGTTGCGAGGATGTAGTCTCAGGAATACAGAATATGTTGTTGGGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATACCATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAGCTTGACAAGCTCATACTCACTCTGTTTGCTACTCTCTTTGTGATGTGTTTAATTGGAGCTATAGGCAGTGGTATCTTCGTAAACAACAAGTATTTCTACTTACGTCTTGATGCAGGTGATGAGGGCTCGGGGCAGTTCAACCCAAAAAATAGAATTCTGGTTATGACTCTGACTATGTTTACCCTCATCACTTTATACTCGACAATCATCCCCATTTCACTTTATGTGTCTATAGAGATGATCAAATTTATTCAGTGCACTCAATTTATCAACAAAGACTTGCGCATGTACCATAATGAAACCAATACCCCAGCATTGGCCAGAACATCCAATCTGAACGAAGAACTTGGGCAGGAAGAGTCAAGAAGTAGTGGGTTGGATTTATATATTGTATTGCCTTATGGCGCAAAGGATGTGAATCCTTTTGGGATTTTCAGCATTTGGACACAGGTTGAATACATCTTTTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGCATCACTGAAATTGAGAGGGGAATAGCTGAGCGCCAAGGCATGAAAATTCAGGAAAATAGATCACCCAATGCAGTGCAAGAGAGGGGTTTCAATTTTGATGATAGTAGGCTTATGCGAGGAGCCTGGAGGAATGAGCCTAATCCCGACAGTTGCAAGGAATTCTTCAGATGCCTTGCTATTTGCCATACCGTACTTCCCGAGGGCGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAAGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCTACAACAATATATGTTCGTGAATCTCATGTTGAAAAGATGGGTAAAATTCAGGATGTGTCTTATGAGATTTTGAATGTGCTTGAGTTCAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGTTGTACTGTAAGGGTGCTGACACTGTAATCTATGAGAGATTGGCTGATGGTAATAATGATATAAAGAAAGCGACTAGGGAGCATTTGGAACAATTTGGATCTGCTGGATTACGTACTTTATGCCTAGCCTGCAAAGAATTACCTCCAGATGTTTATGAAAGCTGGAATGAGAAGTTCATCCAAGCCAAATCTTCTCTTCGTGATCGAGAGAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGGTCTCATTCTGATCGGTAGCACTGCCATAGAAGACAAGCTCCAAGAGGGAGTACCAGCTGCTATAGAGACTCTTCAAAGAGCTGGCATTAAAATTTGGGTTCTTACAGGAGATAAGATAGAAACGGCAATTAATATTGCATATGCATGCAATCTAATAAACAATGAAATGAAGCAATTTGTCATCAGTTCTGAAACTGATGTAATTAGAGAAGCTGAAGAAAGGGGTGATCAAGTGGAAATTGCGCGTGTAATTAAAGAAGAAGTGAAAAAAGAGCTGAGAAGGTGCCTCGAGGAAGCACAGAGCTATCTTTCATCTCTATCTGGACCTAAATTAGCACTTGTAATCGATGGAAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGATGCTGCTGAATTTGAGTTTGAATTGTCATTCAGTTGTCTGCTGCCGAGTTTCTCCATTACAGAAAGCGCAGGTCACAAGTTTGGTCAAAAAAGGTGCACGGAAAATAACACTCAGTATTGGTGATGGAGCCAATGATGTCAGCATGATTCAGGCTGCTCATGTTGGCGTTGGCATAAGTGGGCTGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCACAGTTTCGTTACCTCGCAGATTTATTACTTGTTCATGGCCGGTGGTCATATCTTAGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTAACATTCACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGATTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACGGCACTGCCTGTGATCATTGTTGGGCTATTTGATAAGGATGTCAGTGCATCTCTTTCCTTGAAATACCCTGAACTATACACGGAGGGGATAAGAAATGTCTTTTTCAAATGGAAAGTTGTGGCAGCAAATACTTATTTTGTCATATATGTCTTGATGAGTACAGTCTATTTCTACCTCACAATTCTTGTAGTCCCCATTGTTGCACTTTTTGGTGACTTTGTTTTCCAAGGGGTTCAAAGATGGTTCTTCCCTTACGACTATCAGATTATTCAGGAAATGCATAGACATGATGGCGATAATGGGAGCAGGGTACAATTGCTGGAGGTGGGGAGCCAGCTTACAGCAGCTGAGGCAAGGAGCTATGCCATATCTCAACTCCCTCGTGAGATATCAAGGCACACCGGCTTTGCTTTTGATTCACCTGGGTACGAGTCCTTCTTCGCTGCACAGCTTGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCAAGACGAGCCAGCGCGAGGTCGAAGCCAAAAACCCATAAAAAATAG 3426 0.4194 MSEWDRAVASSSSSSRSTLRMGSNPNRNLASRVPSNRTVRLGRVQPQAPGHRTVFCNDREANLPVRFKGENEQEAWNRPVSPITNVAPLSLVLLISLIKEAFEDWKRFQNDLAVNNNMIDVLQDQKWESIPWKRLQVGDIVRVKQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPDKASEFKGEIQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYVVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFVMCLIGAIGSGIFVNNKYFYLRLDAGDEGSGQFNPKNRILVMTLTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINKDLRMYHNETNTPALARTSNLNEELGQEESRSSGLDLYIVLPYGAKDVNPFGIFSIWTQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGITEIERGIAERQGMKIQENRSPNAVQERGFNFDDSRLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGNNDIKKATREHLEQFGSAGLRTLCLACKELPPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENGLILIGSTAIEDKLQEGVPAAIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREAEERGDQVEIARVIKEEVKKELRRCLEEAQSYLSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSLKYPELYTEGIRNVFFKWKVVAANTYFVIYVLMSTVYFYLTILVVPIVALFGDFVFQGVQRWFFPYDYQIIQEMHRHDGDNGSRVQLLEVGSQLTAAEARSYAISQLPREISRHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASARSKPKTHKK 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4388 1141 Pfam E1-E2 ATPase 117 355 - -
Sto6g4388 1141 SFLD C1.7: P-type atpase like 424 913 - -
Sto6g4388 1141 CDD P-type_ATPase_APLT_Dnf-like 79 1024 - -
Sto6g4388 1141 MobiDBLite consensus disorder prediction 1 42 - -
Sto6g4388 1141 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Sto6g4388 1141 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 835 941 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g4388 1141 MobiDBLite consensus disorder prediction 1 43 - -
Sto6g4388 1141 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 438 699 IPR023299 GO:0000166
Sto6g4388 1141 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 426 1006 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto6g4388 1141 Pfam Cation transport ATPase (P-type) 528 622 - -
Sto6g4388 1141 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Sto6g4388 1141 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Sto6g4388 1141 SFLD p-type atpase 424 913 IPR044492 -
Sto6g4388 1141 SUPERFAMILY HAD-like 426 918 IPR036412 -
Sto6g4388 1141 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 78 396 - -
Sto6g4388 1141 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 425 1006 - -
Sto6g4388 1141 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1007 1137 - -
Sto6g4388 1141 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 71 - -
Sto6g4388 1141 SUPERFAMILY Calcium ATPase, transmembrane domain M 82 1034 IPR023298 -
Sto6g4388 1141 Gene3D - 557 682 IPR023299 GO:0000166
Sto6g4388 1141 Gene3D - 692 902 IPR023214 -
Sto6g4388 1141 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 425 1006 - -
Sto6g4388 1141 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 32 71 - -
Sto6g4388 1141 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1007 1137 - -
Sto6g4388 1141 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 78 396 - -
Sto6g4388 1141 Gene3D - 99 264 - -
Sto6g4388 1141 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1004 IPR032630 -
Sto6g4388 1141 SUPERFAMILY Calcium ATPase, transduction domain A 116 260 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4388 Sto-Chr6 46356329 46371909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4388 1007 1141 Primary Pumps ATPases AT1G59820 76.296 7.35e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4388 K14802 - gmx:100815547 1693.32