Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4385 ATGGCATGGCATGAAGATGATCACAAAAGCTGCAATATTAAGAGAATGGGGATTTTGGGGTTGCAAATGTTTGATTTCATGGCTTGGAAGCCACGTCTTGATTTGAGCCTGGTCTTAACCTTTCTCGTTAATCTGGCAATAATCTGTAATTGCCAGCCTCAGAACATAGAAACCTTCTTTCCAATTCAAACTCCAGCCCCTGCTTCAACCATATCCAAAACTTCTTCTTCGTCCAACAGTAAGATAGCTGCGGCTGTAGCTGCTACTGCAGCAGGCACTTTGGTTGTTTCGGGTTTGCTTTTCTTTTTGATCCGAACATGTTTGAAGAAAAGACGCAGAGAGGAGATAGCTGCTTCAGCGCCCCACACCGACGTGTTTGAGCGAATTGACGGAAATGTGAGGGGTTTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAGGAAGCTTCAAGCCAACAACAACTCCTTACAGAAGGACGTCATTCCTACTCATCAAAGCAAACACCAAGAACCAAATCATCCAACCACAAACTCTGAATCCATTCAAGAGATTCCTCTGCTTCGTGGCCACTCCTCGGCTTCCCATGTCACTATATTATCAGAAGATGAACTTGAGTCAAATTCAAGTACCAGAACAAGTATGTCAACAACAACTCCTCCTGCTATTCCAAAAGAAAAAATCCCTCCGGCGCCGCCACCTCCACCACCCATGGCCGGTGCTTTCAAGTCATCTTCAAAACCACCACCTGCCCCCGTTGCAGTTGCAGTTGCAGACAATGATAAGGTGAAATTGAAGCCTTTGCATTGGGATAAGGTGAATGCTAATGCTGATCATTCTATGGTTTGGGACAAAATGGATCGTGGTTCTTTTAGGGTTGATCAAGATCTCATGGAAGCACTCTTCGGATTCGTGGCCACCAGCAGAAGAAGCCCAAAAGGGCAAAACAACCCCTCAACAACTCCAAGCCATGCTCCTTCATCATCAAAAACTTTCATTCTTGAATCCAGAAAATCACAAAACATTGCTATTGTTTTAAAGTCCCTGGCAGTGTCACGAGAAGAAATTGTGGATGCCCTGAATGAGGGTCAAGGCCTTAATGCGGATACCATTGAAAAGCTAGCTAGAGTTGCCCCAACACAAGAGGAGCAATCTGATATCCTTGAATACAAAGGAGACCCAACAACACTTGCTGTTGCAGAATGTTTCCTCTATCACATCCTCAAAGCTGTTCCTTCAGCTTTCAAGCGCTTCAATGCCATGCTTTTCAGGTTCAACTATGACTCCGAGATACTAGAAATCAAGGAATCTCTAAACACCCTTGAACTGGGCTGTAAGGAGCTTCGGAATAGAGGACTCTTTGTGAAGCTTCTTGAAGCAGTCCTTAAGGCTGGAAATCGTATGAATGCTGGTACTTCTAGAGGTAATGCTCAAGCTTTCAACTTGACTTCTTTAAGGAAGCTGTCTGATGTCAAAAGCACCGATGGAGAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGGTCTGAGGGAAGACGTTGTGTTCTCAACCTGATTAAGATAAGAGAGTCTGAAAACTCCGTTTCAGATGAAGACAGAGAAAAGGAATATCTAACGCTAGGATTACCATTTGTAGGAGGAATCAGTGCCGAGTTCTCCAATGTAAAGAAAGCAGCCCTTATAGATTACACTAGTTTAGTTGGTTCAATCTCAGCTCTATCAACCCGGATGGCTCAAGTTCAAGATCTTGTTTCCCAGTGTCGAGGAGGAAACTTTGTGAAAGAAATGGAGCGCTTTCTGAGAAATGCTGAGGAGGAATTGAGATCAGTGAGAAATGAGGAAACAAGGATAATGCAGCTTGTCAAGAGGACAACAGAATATTATCAAGGAGGAACTTCAAAAGATGCACCCCAAAACCTTCAAATATTTGTCATCGTCAAGGATTTCCTGAGAATGGTTGATCAAGCCTGCATTGACATTGCTCGTACCATGCAGAAGAGGAAGGTAGCCAAGGCCAGTTCTGGATGA 2037 0.4379 MAWHEDDHKSCNIKRMGILGLQMFDFMAWKPRLDLSLVLTFLVNLAIICNCQPQNIETFFPIQTPAPASTISKTSSSSNSKIAAAVAATAAGTLVVSGLLFFLIRTCLKKRRREEIAASAPHTDVFERIDGNVRGLIVDENGLDVIYWRKLQANNNSLQKDVIPTHQSKHQEPNHPTTNSESIQEIPLLRGHSSASHVTILSEDELESNSSTRTSMSTTTPPAIPKEKIPPAPPPPPPMAGAFKSSSKPPPAPVAVAVADNDKVKLKPLHWDKVNANADHSMVWDKMDRGSFRVDQDLMEALFGFVATSRRSPKGQNNPSTTPSHAPSSSKTFILESRKSQNIAIVLKSLAVSREEIVDALNEGQGLNADTIEKLARVAPTQEEQSDILEYKGDPTTLAVAECFLYHILKAVPSAFKRFNAMLFRFNYDSEILEIKESLNTLELGCKELRNRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLTSLRKLSDVKSTDGETTLLHFVVEEVVRSEGRRCVLNLIKIRESENSVSDEDREKEYLTLGLPFVGGISAEFSNVKKAALIDYTSLVGSISALSTRMAQVQDLVSQCRGGNFVKEMERFLRNAEEELRSVRNEETRIMQLVKRTTEYYQGGTSKDAPQNLQIFVIVKDFLRMVDQACIDIARTMQKRKVAKASSG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4385 678 SUPERFAMILY Formin homology 2 domain (FH2 domain) 233 673 - -
Sto6g4385 678 PANTHER FORMIN-RELATED 220 674 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto6g4385 678 PANTHER FORMIN-RELATED 33 211 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto6g4385 678 MobiDBLite consensus disorder prediction 224 244 - -
Sto6g4385 678 Gene3D Formin, FH2 domain 258 668 IPR042201 -
Sto6g4385 678 MobiDBLite consensus disorder prediction 203 252 - -
Sto6g4385 678 MobiDBLite consensus disorder prediction 203 222 - -
Sto6g4385 678 MobiDBLite consensus disorder prediction 309 332 - -
Sto6g4385 678 Coils Coil 596 623 - -
Sto6g4385 678 SMART it6_source 256 671 IPR015425 -
Sto6g4385 678 Coils Coil 432 452 - -
Sto6g4385 678 MobiDBLite consensus disorder prediction 310 332 - -
Sto6g4385 678 ProSiteProfiles Formin homology-2 (FH2) domain profile. 256 678 IPR015425 -
Sto6g4385 678 PANTHER FORMIN-LIKE PROTEIN 4 33 211 - -
Sto6g4385 678 PANTHER FORMIN-LIKE PROTEIN 4 220 674 - -
Sto6g4385 678 Pfam Formin Homology 2 Domain 260 657 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4385 Sto-Chr6 46342957 46345087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4385 29 673 FH2 protein (formin) Gene Family AT1G70140 48.271 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4385 - - adu:107481275 694.886