Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4372 ATGATGTCGGTTTCCTGCTCCGATGACTACTTCCGCGATTCCGACCTTCTCTGCTGCGAGGACACCTCCGGAATACTGTCTGATGAATCGCCGGAATGCTCCTCCGACTTCGATCCCTCCTCGCCGTCGCCGGTATATCTGGAGGAGTCGATAGCCGGATTCATCGAAGAGGAGCGCAACTTCGTTCCTGGATTCGATTACTTTTCCAGATTTGAATCTCAGTCGCTCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCGAGCATTCTACGGTTTCCAGCCGCTGACGGCGTATCTATCCGTCAACTATTTGGACCGCTTTTTGGATTCTCGCCGGTTGCCTGAAACAAATGGGTGGCCGCTGCAACTTTTATCTGTTGCTTGTTTGTCTTTGGCTGCAAAGATGGAGGAACCTTTAGTTCCGTCCCTTCTGGATCTTCagGTAGAAGGtgccaaatatatatttgagcCAAGGACAATTCGTAGGATGGAACTACTTGTTCTGAGTGTTTTAGATTGGAGGCTAAGATCAGTCACGCCGTTTAGCTTCCTCGCTTTTTTTGCTTGCAAGCTCGATTCAACTGCAACTTTTACGGGATTGCTCATTTCCCGGGCCACAGATATCATCTTATCTAACAtccaagAGGCTAGTTTTCTTGCCTACTGGCCATCATGCATTGCTGCCGCGGCCATACTTTGTGCAGCCAATGAAATTCCTAACTGGTCTATTATTAAGCCGGAGCATGCTGAGTCATGGTGTGAGGGACTGATAAAAGAGAAAATCATAGATTGCTACCAGCTGATGCAAGAACTTGTGGTAGACAGTAACCGGAGGAAGTCACCTAAAGTGTTACCTCAGTTTCGAGTAACAATTGAACCCAGCAGAATGAGGTCAAGTATCTTATCCTTGTCATCGTTTTCCTCATCCTCCTCCTTCTCGTCGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTGTTGGTCGATGGTGACAACGGAAACTCCCagtga 1023 0.4633 MMSVSCSDDYFRDSDLLCCEDTSGILSDESPECSSDFDPSSPSPVYLEESIAGFIEEERNFVPGFDYFSRFESQSLDASAREESVAWILKVRAFYGFQPLTAYLSVNYLDRFLDSRRLPETNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSVTPFSFLAFFACKLDSTATFTGLLISRATDIILSNIQEASFLAYWPSCIAAAAILCAANEIPNWSIIKPEHAESWCEGLIKEKIIDCYQLMQELVVDSNRRKSPKVLPQFRVTIEPSRMRSSILSLSSFSSSSSFSSSCKRRKLNNCLLVDGDNGNSQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4372 340 Pfam Cyclin, N-terminal domain 53 180 IPR006671 -
Sto6g4372 340 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Sto6g4372 340 Pfam Cyclin, C-terminal domain 183 291 IPR004367 -
Sto6g4372 340 Gene3D - 64 181 - -
Sto6g4372 340 Gene3D - 55 244 - -
Sto6g4372 340 SUPERFAMILY Cyclin-like 165 285 IPR036915 -
Sto6g4372 340 PANTHER CYCLINS 2 328 IPR039361 -
Sto6g4372 340 SUPERFAMILY Cyclin-like 43 180 IPR036915 -
Sto6g4372 340 SMART Cyclin_C_2 183 309 IPR004367 -
Sto6g4372 340 CDD CYCLIN 87 173 IPR013763 -
Sto6g4372 340 SMART cyclin_7 86 174 IPR013763 -
Sto6g4372 340 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 2 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4372 Sto-Chr6 46266700 46270899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4372 2 340 Core Cell Cycle Gene Families AT1G70210 61.290 1.14e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4372 K18810 - gmx:100775224 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4372 6 46266700 46270899 Sto6g4372 6 46266700 46270899 ECH