Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4344 ATGGCATCAAGATCATTTGCTAATCTCCTAGACTTGGCTGGTGGAGACTTTCCTCACAGCCCAAGAATTCTTCCAAGAGTTACGACTGTTCCTGGAATTATTTCTGACCTGGATGGTTACAGTAATAATGATGTGGATTCAGATGTTAGCTCCTCTGGATGTCAGGAGCGGAAAATTATAGTGGCAAACATGCTGCCATTGCAAGCTAAAAGGGATACAGAAACTGCTAAATGGTGTTTTAGTTTGGATGAGGACTCAATTTTATTACAATTGAAAGATGGTTTCTCATCTGATACTGAAGTTATCTATGTGGGTTCTCTGAAGGTTGAAATAGATGTGAGTGAGCAGGAAGAAGTTGCTCAGAAATTACTTGAGGACTTCAATTGTGTGCCCACATTTCTACCACATGAACTCCAGAAAAAGTTTTACCTTGGCTTTTGTAAGCAACAGCTGTGGCCCCTCTTTCACTACATGCTACCAATGTTCCCAGATCATGGTGACCGTTTTGACCGCTCGCTTTGGCAGGCTTATGTTTctgcaaataaaatatttgcagACAAGGTTATGGAAATTATTAATCCTGATGATGACTTTGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCTACATTTCTGCGGAAGCGATACAATCGTGTTAAACTTGGATTCTTTCTTCACAGTCCTTTCCCCTCATCTGAAATTTACCGAACTCTGCCAGTACGAGATGAAATTCTGAGGGGGTTGTTGAACTCTGACTTAATTGGCTTTCATACATTTGATTATGCTCGTCACTTTCTCTCTTGCTGCAGCAGAATGCTGGGTTTGGACTATGAATCTAAGCGGGGACATATAGGACTTGACTACTTTGGCCGCACGGTATATATTAAAATCTTGCCTGTAGGTATTCACATGGGTAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAAATAAAAGAGATTGAGGAAGAGTTCAAGGGTAGGAAGGTGATTCTGGGTGTTGATGACATGGATATCTTTAAAGGCATAAGCTTGAAGCTTCTCGCTGTGGAGCAACTGCTGCAGCAGAACCCAGATTTACAGGGCAAAATTGTCCTAGTGCAAATTGTAAATCCTGCGAGGGGTCTAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGAATCAATGATACATATGGCTCAAAACATTATCTGCCAGTTATTCTCATTGACCGTCCTGTGCCTCGTTTTGAGAAGAGTGCCTATTATGCCGTCGCAGAGTGTTGCATTGTCAATGCTGTGAGGGATGGCATGAACTTAGTCCCGTATAAGTATGTTGTTTGCAGACAAGGAACTACACAACTGGACAAATCATTGAATAGAAAAAGTGATTCTCATCGCACAAGCGTGCTTGTTGTGTCTGAGTTCATTGGTTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAACCCCTGGGATATTGATGCTGTTGCTGATGCTCTGAATCTGGCCATTACAATGTGTGATTCAGAGAAGCAATTGAGGCATGAGAAACACTATCGTTATGTCAGTTCCCATGATGTAGCTTATTGGGCACGCAGCTTCATGCAGGATCTGGAAAGAGCATGCATTGATCATTACACCAAAAGGTGCTGGGGAATCGGTTTGGGTCTAGGTTTCAGAGTTGTTTCTCTTACTCCTGGTTTTAGAAAGTTATCCATTGACCACATTGTCTCAGCATACAAAAGAACCAACAGAAGGGCCATATTTCTTGATTATGATGGTACAGTTGTACCACACTCTTCTATAAATAAAATCCCCAGCTCTGAAGTCATATCTGTGCTAAATACGCTGTGCAATGATGCCAAGAATAATGTCTTCATTGTTAGTGGGAGGGGAAGAGACTCTCTGAGTGAGTGGTTTGCTTCGTGCAAAATGCTGGGACTTGCAGCCGAACATGGGTACTTTCTAAGGTGGAATAGAGACTCAGAATGGGAATCTAGTCACTTGTCTGCTGACCTTGATTGGAAAAATATCGTGGAACCTATCATGACTTTGTATACAGAGACAACTGATGGGTCTAACATTGAAATTAAGAAAAGTGCCTTGGTGTGGCATCATCAAGATGCAGACCCGGATTTTGGCTCTTGCCAGGCAAAAGAATTATTGGATCACCTGGAAAGCGTGCTTGCTAATGAACCAGCAGTCGTTAAGAGGGGCCAACATATTGTTGAAGTGAAGCCGCAGGGAATAAGCAAGGGTTTGGTAGCAGAGAAGGTTCTTTCGACTTTGGTAAATGGTGGGAACCCACCGGATTTTGTGATGTGCATTGGAGACGATAGGTCGGATGAAGACATGTTTGAGAGCATATTAAGGACAGTTTCTTGTCCTTCATTGCCAGTAGCTCCAGAGATTTTTGCTTGCACAGTAGGTAGGAAGCCTAGCAAGGCCAAGTATTACCTTGATGATACTGCTGATGTTGTGAAATTGCTTCAGGGCTTCGCTTCGGCGTCTATTCCAAAGCCAAAGCATCTAGCCCAATTCCAGGTTTCTTTTGAAAGCACAGTTTGA 2577 0.4222 MASRSFANLLDLAGGDFPHSPRILPRVTTVPGIISDLDGYSNNDVDSDVSSSGCQERKIIVANMLPLQAKRDTETAKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVEIDVSEQEEVAQKLLEDFNCVPTFLPHELQKKFYLGFCKQQLWPLFHYMLPMFPDHGDRFDRSLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIEEEFKGRKVILGVDDMDIFKGISLKLLAVEQLLQQNPDLQGKIVLVQIVNPARGLGKDVQEAKKETYLIAQRINDTYGSKHYLPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTTQLDKSLNRKSDSHRTSVLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLAITMCDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACIDHYTKRCWGIGLGLGFRVVSLTPGFRKLSIDHIVSAYKRTNRRAIFLDYDGTVVPHSSINKIPSSEVISVLNTLCNDAKNNVFIVSGRGRDSLSEWFASCKMLGLAAEHGYFLRWNRDSEWESSHLSADLDWKNIVEPIMTLYTETTDGSNIEIKKSALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGISKGLVAEKVLSTLVNGGNPPDFVMCIGDDRSDEDMFESILRTVSCPSLPVAPEIFACTVGRKPSKAKYYLDDTADVVKLLQGFASASIPKPKHLAQFQVSFESTV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4344 858 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 849 - -
Sto6g4344 858 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 545 - -
Sto6g4344 858 CDD GT20_TPS 57 542 IPR001830 GO:0003824|GO:0005992
Sto6g4344 858 Gene3D Glycogen Phosphorylase B; 50 309 - -
Sto6g4344 858 Pfam Trehalose-phosphatase 592 826 IPR003337 GO:0003824|GO:0005992
Sto6g4344 858 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 590 791 IPR006379 -
Sto6g4344 858 Pfam Glycosyltransferase family 20 57 542 IPR001830 GO:0003824|GO:0005992
Sto6g4344 858 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 849 IPR001830 GO:0003824|GO:0005992
Sto6g4344 858 TIGRFAM T6PP: trehalose-phosphatase 587 834 IPR003337 GO:0003824|GO:0005992
Sto6g4344 858 Gene3D Glycogen Phosphorylase B; 310 526 - -
Sto6g4344 858 CDD HAD_TPP 590 831 - -
Sto6g4344 858 SUPERFAMILY HAD-like 589 836 IPR036412 -
Sto6g4344 858 Gene3D - 718 847 IPR023214 -
Sto6g4344 858 Gene3D - 588 706 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4344 Sto-Chr6 46086649 46089431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4344 1 858 Trehalose Biosynthesis Gene Families AT1G23870 74.394 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4344 K16055 - gmx:100818536 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4344 6 46086649 46089431 Sto6g4344 6 46086649 46089431 ECH