Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4338 ATGGGACTTGTGGCTATAGAGAATGATGATGAAGAGGGAAACGACGCCGACGAGCATGTAAGCGACGGCGAAGATGCGGTCAACGCTGGCTCCGGGGTACAGGTAAGAGAAGTAATCGACAGCGGTGATGAAGGCATTCCATGGGAGAAGGTAGCCGAGGCCGAGGGTGAAGTAGATGATGTAGGCAAAGTGGCCCTTGTCTTGGGGAATCTTGTTGGGTGTGGCTTCGTGAGTTGTGGTGGAACTAAGGAGGCGAGAGGACGGCATGCAAATCAAACTGAAAAAATATACTTGAATCCATCAGAGCAAGAAAACTGCTTAGCGTCAATCAAAGTGTTTGAGAAGAATATTTCAGGCTGTGGAGTAGCCAAGCTTACAAGTGGAGCTGGTGGTTGCTCTGAATACTCTGTCATGGATGTTATGGACAAGCTTGGAGATCAACTGAGAAGATTAGATGAAGATTGTATGGCTTTAAGTATTGATGGTAGAACAAATGAGACTTGTAGTGCATGTTTGAGAAGGTGGGAGGAGATTAGTGCAACATCAGACAACAAGAGGGACTCAGAATCTGCAAATAATATTGATGCCAATCTTTGTAGGTTTGCTGTACTAATCTCACTCACCAGCATCACAAGTTATGATAGGGAATCAATTCAGGCAGTTTATGAATGCCTTTCCACTTACAGCCTTTCAGCAGTCACAAATAAGCAAGGAGGCAAAGACAGTGGGAATTCTAAGATCCACCCAGGTCTCTGGGTATTATCCTTTGGCTTAGCTGGAATCACAATGATAGTGCTTCTTGCAGCATGGACCTtgtatagaaaaagaaatggtAGTCCTCCAAAAGAACAAGgagAGACAGAGGATTCAACTTCTCTTAAGATAACTATAAAGGAAGTATATATGGCAACCAACAATTTCAGCCCATCAAACTTCATTGGCGAAGGCGTAGCTGGAAAAGTGTACAAAGGTATACTGTCCAACGGTCAACATGTTGCCATTAAGCGAATAATGAATGAAGGGCAGTTAGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTAAGGCATCCAAATTTAGTATCTTTGGTGGGATACTGTGAAAGTGAAGGTGAATGCTTCCTAGTAGCTGTTATGATAGGAAAAGATAAAGTTCTTTCGTGgattcaaagactaaaaattGCGGTTGATAGTGCAAAAGGTCTAGTGTTTCTCCACACCTATCCAGCTGGCTGCATTATTCACCGTGATATTAAGCCGTCAAACATTCTCATTGGTACCAACTTGCAAGCAAAACTTTCAGACTTTGGGTTGTCCAAGTTTATGGACGTAGGTCAATCCTTTGTAAGCTCCGAAGTGAGAGGAACATTAGGGTATATTGATCCTGAGTACAGGAGAAATCACCACGTGAAAGCCTCAGGAGATGTCTACAGTTTTGGGATAGTGTTACTGCAACTGCTATCAGGACAGAGGGTCATCAACATCAATTTTCAAAGACCAATGTCCCTAAATAAAATGGTGAGATCCATGCTATTGTTACAAAATATTGAGGCCATAAATTTTGCTAGAGGTGGAGATGTATCAGAATTTGTTGACTCTAAATTGAAAGGGGATTACTCTGAAGAAGCCTTCAGCATTACGCTAAAACTAGCTTTGTTATGCATAGGGATCAAGCAACAAAGGCCATCTATGGAGCAAGTGTTACCGTTAAAGAGGAGTCCAAATATAGCAACCAGGCCATTTTTTTTGCCTCTATCGGAGCCATCTTTGATCAGACTGATCAAACTTGAGATTGCTTCTGGCTCCTCCCCTATCAATTTTCTGTTCTTCTCATCAGAAGCAAGGATGACAAGTCTTGTTGATGTCACGATCACGATTCTTTTGACCCACATCAGGAACGGGAATGCCGTTTTGAGAACAATACTGATGAATCAAGGCACGAAGCGCCAAATTAGGTACCAGTTCGATGCTGCTAAGGCTTTTCCCTGTCTTGGGGCAAATAGGATTTCCACTGTTGAACCATTTGAGAATCGAAGAGCGATCAATCAAAAGGAAAGACGTCCAGAGCCGTGGCAACGGATTTGGACAAGATGTGAAAATGGGTGGCGATCCGATCCGACTCCATCAGCATCCATAGTTTATAGCCTTCGCGAGTGCAGTCTTGAAGCAGGAACTGGAGCTTTTGGAAGGAAGGGAATAGAGGGTGACACGCGTCAGCGTAGGATTCGTTGGCATCCAAGTTTTGAAGGAAGGATAGTTCGTAGATTGTTTGGAAGTGAGGAGAGAGTGACGCGTGGCGCGATAATTATGGAAAGGACTCGTGATATTGAAGATGCTATAGCGTCTTTGGCGTTTATGTTGGATGATGGTCTTTGCCTTTTCCCTAATCCTCCTACTGAGGCGGTCCCTGTTCTCCAGAGTGATTTGCTAGGTGATGGTGTAGTCAGGGCGGTTGCTGTTTAG 2466 0.4323 MGLVAIENDDEEGNDADEHVSDGEDAVNAGSGVQVREVIDSGDEGIPWEKVAEAEGEVDDVGKVALVLGNLVGCGFVSCGGTKEARGRHANQTEKIYLNPSEQENCLASIKVFEKNISGCGVAKLTSGAGGCSEYSVMDVMDKLGDQLRRLDEDCMALSIDGRTNETCSACLRRWEEISATSDNKRDSESANNIDANLCRFAVLISLTSITSYDRESIQAVYECLSTYSLSAVTNKQGGKDSGNSKIHPGLWVLSFGLAGITMIVLLAAWTLYRKRNGSPPKEQGETEDSTSLKITIKEVYMATNNFSPSNFIGEGVAGKVYKGILSNGQHVAIKRIMNEGQLETFVREVRSLSHVRHPNLVSLVGYCESEGECFLVAVMIGKDKVLSWIQRLKIAVDSAKGLVFLHTYPAGCIIHRDIKPSNILIGTNLQAKLSDFGLSKFMDVGQSFVSSEVRGTLGYIDPEYRRNHHVKASGDVYSFGIVLLQLLSGQRVININFQRPMSLNKMVRSMLLLQNIEAINFARGGDVSEFVDSKLKGDYSEEAFSITLKLALLCIGIKQQRPSMEQVLPLKRSPNIATRPFFLPLSEPSLIRLIKLEIASGSSPINFLFFSSEARMTSLVDVTITILLTHIRNGNAVLRTILMNQGTKRQIRYQFDAAKAFPCLGANRISTVEPFENRRAINQKERRPEPWQRIWTRCENGWRSDPTPSASIVYSLRECSLEAGTGAFGRKGIEGDTRQRRIRWHPSFEGRIVRRLFGSEERVTRGAIIMERTRDIEDAIASLAFMLDDGLCLFPNPPTEAVPVLQSDLLGDGVVRAVAV 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4338 821 PANTHER - 84 579 - -
Sto6g4338 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Sto6g4338 821 ProSiteProfiles Protein kinase domain profile. 307 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4338 821 Pfam Protein kinase domain 311 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4338 821 PANTHER OS01G0750732 PROTEIN 84 579 - -
Sto6g4338 821 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Sto6g4338 821 MobiDBLite consensus disorder prediction 1 26 - -
Sto6g4338 821 SUPERFAMILY Protein kinase-like (PK-like) 290 569 IPR011009 -
Sto6g4338 821 Gene3D Transferase(Phosphotransferase) domain 1 378 578 - -
Sto6g4338 821 Pfam SPARK 84 189 IPR043891 -
Sto6g4338 821 SMART serkin_6 307 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4338 Sto-Chr6 46036961 46050962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4338 274 569 Receptor kinase-like Gene Family AT1G49100 39.130 1.75e-51 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sto6g4338 Pkinase 5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4338 - - gmx:100790181 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4338 6 46036961 46050962 Sto6g4338 6 46036961 46050962 ECH