Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4327 CTGCTCGCTTTCTCCGCCGTTCCCTTCCCTTTCACCGTGTCGCCGCTGCTACGCTTGTTGGCGCTCGCCGCCGCTGGATTCAAAAACACGAAGGCGTTGTTTCCGTCACTATTGCTCCGGAGCTTCAAGTCCCGGAACCTCCAGAGCCTTGAGAATCCTGTGGAATTGCTCTTCTTGCAACTCTCCTTCGAGACCTCCATGACCTTCTTCCTCGACCACCCGCAGTACGATCCTACAGGCGCTCCCTTCCATTGGTCCGATTCAGTGTCCTCCGACGACAACGGCGAAGAAATGTCGCGCCGTTCCACAAAGAGCTTTCTCACCGGCGGCCGGAGAGGGGAGGAGCCGTTAAACTGCGGGCGGATCTGGCCGTTGAGAAAGAGCTCGAAGCGAGAGGATTTAATTTGCGTTGGGAAATTTCTGATTGAAGAATCAGAAATGGCTTTGCCAAGCTCCAACAACGATTTTAATTCCAGACCAAATGGGTTCTCCATTTCTAAGAAAGAGTCCACCGATGATGCGGCTCCATCGCCAagctcttcctcctcctcctcctccaacaCTGAAAATTCTCCGCCCAAAATTTCTCCAATCCCCTCACCATCGTCGCAGTCCAATTCTACCTCGCCTCCCTCCAACTCGTCTCCACCGACATCGCCATTCCCAGATGGTTCATCCTCCCCCGGTAATAAAACCTCCGGCGACTCGTCTCCATCGCCATCACCTCCGCCTTCAACCACTCTATCCCCTCCTAATGCCACTTCTTCATGGAATACACCTAGCTCCCCTCCGCGACCAGCCGCGTGGAACCCCCCATCACCGCCAAATTCACGGGGCTTGGACTCTGGCTCCACCTCAAATTCAAACAGTTCTTCAAGAAGATCCTCCTCGCCGTCATTGTCAGGAGGTGGCGGTGGTAATAACTCAGGGAAATATGTTGGCTATGCAATGGCCGGAGTGTTGGGTTTAATCCTTGTTGccttatttttcgtttttatggtgaagaggaagagaaaacgAAGGAGAGTCCGTGCTCCACCTATTAACCCTCCAAGGAAACCAGGTAGAGTGTCTGTGCCCAATTTCTGCTCTGCTGattGTCCCCTTCAGCAGCCTGTCATGGCGAATTATGCACAAGAGTGCTTTTATTCTCCAACCGCAACCACTCCCAGTCCCAACTATGGATCTGGGAGTCAAATAGGAGCTGTGCAACATTTGAGGGGTCCAGACTCAGGGCCCTGGAGTGCTGGTCAGATAATTTTTAGCTATGAGCAGATTTTGGAAATAACACAGGGATTTTCTAGTGAAAATATTATTGGAGAGGGGGGATTTGGATGTGTGTACAAGGGTTGGCTTTCAGATGGAAGAGCAGTGGCTGTGAAGCAACTTAAGGCTGGAAGCGGTCAAGGTGAACGGGAATTTAGAGCAGAGGTTGAGATTATCAGCCGTGTTCATCATCGGCATTTGGTGTCATTAGTTGGTTTTTGCACAGCTGATCACCGAAGAGTTCTTATATACGAGTTTCTTCCCAATAAAACACTTGAGCATCACTTGCATGCAAAAGGAGAACAAGTGTTAGATTGGGACAAGAGGATGAAGATAGCCATCGGATCTGCAAAAGGCTTAGCATATTTGCATGATGATTGCAACCCAAAGATTATCCACAGAGATATTAAGTCAGCAAACATACTTTTGGATAATGCGTATGATTCGAAGGTTGCAGACTTTGGACTTGCCAGGCTAGCTGATCATGAGAACACGCACGTATCAACTCGGGTTATGGGGACCTTCGGGTACTTGGCTCCAGAATATGCAACAAGTGGAAAATTGACCGATAGGTCAGATGTTTTCTCCTTTGGAGTTGTGCTTCTTGAGCTTATAACTGGGAGGAAACCTGTTGATCAAACTCGGCCTGTGGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTTCGTCGTGCAGTTGAAACCCAAGACTTTAGTGAATTAGTAGATGAAAGGCTTAACAAGCAATTCGTGGAAAGTGAGATGTGCAGAATGATTGACGCTGCTGCAGCTTGCGTTCGTCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATAGTCAACAAGAAGTGACTGATTTATCAAATGGGGTGAAATATGGTCAGAGCACCATTTATGATTCCAATCAGTATAAAGAAGAGATTATGAGATTCAGGAAGACAGCCGGGGGCAGCTTTGGTGAGTCTGAATTTGATTTGGACAGTGGAGAATACACTTCTTCAGTAGAATCTTCTGGACAACATGCGTGGTCCAAGAATTGTTCAAGTGGTGAGATAGAATCTCAAGCTTTTTACGCAAAAAGGAGTACTGAACGAGGGCAAACATGA 2391 0.4718 LLAFSAVPFPFTVSPLLRLLALAAAGFKNTKALFPSLLLRSFKSRNLQSLENPVELLFLQLSFETSMTFFLDHPQYDPTGAPFHWSDSVSSDDNGEEMSRRSTKSFLTGGRRGEEPLNCGRIWPLRKSSKREDLICVGKFLIEESEMALPSSNNDFNSRPNGFSISKKESTDDAAPSPSSSSSSSSNTENSPPKISPIPSPSSQSNSTSPPSNSSPPTSPFPDGSSSPGNKTSGDSSPSPSPPPSTTLSPPNATSSWNTPSSPPRPAAWNPPSPPNSRGLDSGSTSNSNSSSRRSSSPSLSGGGGGNNSGKYVGYAMAGVLGLILVALFFVFMVKRKRKRRRVRAPPINPPRKPGRVSVPNFCSADCPLQQPVMANYAQECFYSPTATTPSPNYGSGSQIGAVQHLRGPDSGPWSAGQIIFSYEQILEITQGFSSENIIGEGGFGCVYKGWLSDGRAVAVKQLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGFCTADHRRVLIYEFLPNKTLEHHLHAKGEQVLDWDKRMKIAIGSAKGLAYLHDDCNPKIIHRDIKSANILLDNAYDSKVADFGLARLADHENTHVSTRVMGTFGYLAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTRPVGEESLVEWARPLLRRAVETQDFSELVDERLNKQFVESEMCRMIDAAAACVRHSAPKRPRMVQVVRALDSQQEVTDLSNGVKYGQSTIYDSNQYKEEIMRFRKTAGGSFGESEFDLDSGEYTSSVESSGQHAWSKNCSSGEIESQAFYAKRSTERGQT 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4327 796 ProSiteProfiles Protein kinase domain profile. 433 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4327 796 CDD STKc_IRAK 439 707 - -
Sto6g4327 796 MobiDBLite consensus disorder prediction 149 305 - -
Sto6g4327 796 ProSitePatterns Protein kinases ATP-binding region signature. 439 461 IPR017441 GO:0005524
Sto6g4327 796 Pfam Protein tyrosine and serine/threonine kinase 436 706 IPR001245 GO:0004672|GO:0006468
Sto6g4327 796 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 151 772 - -
Sto6g4327 796 MobiDBLite consensus disorder prediction 275 305 - -
Sto6g4327 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Sto6g4327 796 MobiDBLite consensus disorder prediction 87 112 - -
Sto6g4327 796 Gene3D Transferase(Phosphotransferase) domain 1 509 726 - -
Sto6g4327 796 MobiDBLite consensus disorder prediction 149 193 - -
Sto6g4327 796 Gene3D Phosphorylase Kinase; domain 1 409 508 - -
Sto6g4327 796 SMART serkin_6 433 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4327 796 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 151 772 - -
Sto6g4327 796 SUPERFAMILY Protein kinase-like (PK-like) 412 706 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4327 Sto-Chr6 45960115 45966934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4327 263 781 Trihelix Transcription Factor Family AT1G70460 56.464 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto6g4327 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4327 - - gmx:100797563 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4327 6 45960115 45966934 Sto6g4327 6 45960115 45966934 ECH