Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4314 ATGTCAACACTTAACCATCTTTTTGGCCTTCCAGAGCAAATATGTTACGTGCAATGTGGATTCTGCACTACCATTTTAATGGTTAGTGTTCCATGCAGCAGTTTGTCAATGGTGGTGACTGTCAGATGTGGGCACTGCACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCATTACACCTTTTGGCTTCCTTTACTCATAATCTTCAGCCAAGAGAGGGAAGTCCAGAAGAGGAAGCAAACAAGACATTGGACAGCCATAACCATAATGCATCCATGATGACCAATTCTGATTGCGAGGAAGAGGATGTGATTCCCATGAACAGTGTGGTAAATAAACCCCCAGAGAAGAGACAGAGAACGCCATCAGCTTATAACCGCTTCATCAAAGAAGAGATCAGAAGGCTAAAGGCTGAGAACCCTGACATGGCTCACAAGGAAGCTTTTAGCACTGCTGCAAAGAATTGGGCCAATTTCCCCCCAACTCACTGCAAAGGAGATGAAGAAAGCTGTAGCCACACAGAACAACTTGTGGATCTTCACTCCCATTTGGATACTCATTGTGATGATGCTGAGGttaatgaagatgaagaaggccAAGCTTTACGTGAAAGAAAGGTTCCAAGGAATTCCATCTGGGCAAGGACACCTTTTGAGTGA 669 0.429 MSTLNHLFGLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASFTHNLQPREGSPEEEANKTLDSHNHNASMMTNSDCEEEDVIPMNSVVNKPPEKRQRTPSAYNRFIKEEIRRLKAENPDMAHKEAFSTAAKNWANFPPTHCKGDEESCSHTEQLVDLHSHLDTHCDDAEVNEDEEGQALRERKVPRNSIWARTPFE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4314 222 MobiDBLite consensus disorder prediction 73 94 - -
Sto6g4314 222 Gene3D High mobility group box domain 111 172 IPR036910 -
Sto6g4314 222 Pfam YABBY protein 11 167 IPR006780 GO:0007275
Sto6g4314 222 PANTHER PROTEIN YABBY 6-RELATED 1 179 IPR006780 GO:0007275
Sto6g4314 222 PANTHER AXIAL REGULATOR YABBY 4 1 179 - -
Sto6g4314 222 SUPERFAMILY HMG-box 112 164 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4314 Sto-Chr6 45901813 45903445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4314 2 222 C2C2-YABBY Transcription Factor Family AT1G23420 56.277 4.15e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sto6g4314 YABBY 3.4e-65 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4314 K25796 - gmx:100806755 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4314 6 45901813 45903445 Sto6g4314 6 45901813 45903445 ECH