Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4305 ATGGAAATGGAAGTAGCTAAAGAGAGTTCAAGTCGAAGGGAAGAAGCAGGAAGCAAGTTCCGTGTTGCAGTGGATTCGGAACACAAAGCCACAGAGTTGAGACTATTGTCAGCAGCTCATCCTCACATGCGAGCATTCCACCTCTCATggctctccttcttctcctgcTTCGTTTCCACCTTCGCCGCTCCTCCTCTCCTCCCCGTCATCCGCGAcaacctcaacctcacctcCACCGACATCGGTAACGCCGGCGTCGCCTCCGTCTCCGGCATTGTCTTCGCCCGTCTCGCCATGGGCACTGCCTGCGACCTCGTGGGCCCCCGCCTCGCCTCCGCCTCTCTCGTCCTCCTCACTGCCCCCGCCGTCTTCCTCACCGCCACCGTCTCCTCCCCCACCACCTTCCTCCTGGCCCGCTTCTTCACGGGCTTCTCCCTGGCCTCCTTCGTCTCCACTCAGTTCTGGATGAGCTCCATGTTCTCCTCTCCCGTGGTGGGCTCCGCCAATGGGTTCGCGGCCGGGTGGGGCAACCTGGGAGGCGGAGCCACGCAGCTGATGATGCCCCTCGTCTTCGCCCTCATCCGCCACGTGGGATCCCCGCAATTCACGGCCTGGCGAATCGCCTTCTTCATTCCGGGTCTTTTCCAAATGCTAACGGCTTTCGCGGTGCTGATGGCGGGGCAGGACATGCCCGATGGCAACTTCGCGGGGCTCAAGAAGACGCAGGATGACGTGTGGAAGGTGTTGTACTATGGTGTCACCAACTACAGAGCCTGGATATTGGGCCTCACCTATGGCTATTGTTTTGGGGTGGAGCTCACGGTGGATAACATCATAGCCGAGTACTTCTTTGATAGGTTCGATCTCAAGCTTCACACGGCCGGGATGGTGGCGGCGAGCTTCGGGCTGGCCAACGTGGTGGCTCGGCCCGGGGGAGGGTTTGTGTCGGACTTGTTGGCTCGCAGCTGCTTGCGGGCTGACGTTCGGAGTGGTTCCTTTCGTTTCAAGAAGGTCGCTGGGGGTGGTGTGTGGGATGACAGGAGGTGGAGGGAGCGTGGGTGCAATGTTGACGCAACTCATATTCTTCAGAGGCTCAACATTCTCCAAACAAAGAGGGATCAGTCTAATGGGTGTGATGATCTTGATATGCACGCTCCCCATATGTCTAATCTACTTCCCCCAATGGGGAGGCATGTTTATGGGACCATCCACCTCTAA 1218 0.5673 MEMEVAKESSSRREEAGSKFRVAVDSEHKATELRLLSAAHPHMRAFHLSWLSFFSCFVSTFAAPPLLPVIRDNLNLTSTDIGNAGVASVSGIVFARLAMGTACDLVGPRLASASLVLLTAPAVFLTATVSSPTTFLLARFFTGFSLASFVSTQFWMSSMFSSPVVGSANGFAAGWGNLGGGATQLMMPLVFALIRHVGSPQFTAWRIAFFIPGLFQMLTAFAVLMAGQDMPDGNFAGLKKTQDDVWKVLYYGVTNYRAWILGLTYGYCFGVELTVDNIIAEYFFDRFDLKLHTAGMVAASFGLANVVARPGGGFVSDLLARSCLRADVRSGSFRFKKVAGGGVWDDRRWRERGCNVDATHILQRLNILQTKRDQSNGCDDLDMHAPHMSNLLPPMGRHVYGTIHL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4305 405 Gene3D MFS general substrate transporter like domains 40 235 IPR036259 -
Sto6g4305 405 SUPERFAMILY MFS general substrate transporter 39 320 IPR036259 -
Sto6g4305 405 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 3 322 - -
Sto6g4305 405 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 322 IPR044772 GO:0015112
Sto6g4305 405 CDD MFS_NRT2_like 46 317 IPR044772 GO:0015112
Sto6g4305 405 Gene3D MFS general substrate transporter like domains 247 333 IPR036259 -
Sto6g4305 405 Pfam Major Facilitator Superfamily 50 321 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4305 Sto-Chr6 45821912 45823266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4305 1 321 Inorganic Solute Cotransporters AT1G12940 69.632 8.85e-163 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4305 K02575 - zju:107428580 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4305 6 45821912 45823266 Sto6g4305 6 45821912 45823266 ECH