Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4281 ATGGCTCTTTTTCATGCCGCTTATCCACCTCGGTTGCTGTCTTCAATCCGTCACGAATATAGAAACAATATTTTCATCAGAGTTTCTCACCAACGGTTTCATTTTGCTGCTAATACTAGAATTCAGCTTGTCCTGTCCACTCCTGCTTTCAGTTCCAGGCGCATTCTGGTGAGCCCTCCAAAATCATCGCCCATAAGTGGGGTCTCCGTTCAGAACGATATAGATACTTTGAATGAAGGCCACAgggaagacaaagaaaatgtcGAATTTCTGGAGAGACTTAGAAGATGGGTTGGATTCCTTCCGTCGATTTTGCCTGGAGGAAGCTGGTGGGACTTCTCCGATGACGCCGAAGTTCAGGTTTCAGCTAAGCCAGTGACCGTTTGGCGAGCGCTTACCAAAATGTGGGAGCTGGTTGCTCAAGATCGCTGGGTTATTTTTGCGGCATTCTCAACTCTGATTCTAGCTGCGGTTTCGGAGATTTCCATACCACATTTTTTGACTGCATCCATCTTCTCTGCTCAGGGCGCGGAAATCGCAGTCTTCCGACGGAATGTGCGTCTCTTGGTTCTTTTGTGCATTACTTCGGGAATATGCAGTGGGATACGAGGTTGCTGTTTTGGCATTGCAAACATGATTCTGTTCATCACTTCATCGTGTTTTCTTCATTTGGTTAAGAGGATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGCGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACATGATTTTCCGCAATATTCTTCAGGGAACAGGGGCATTGATCTACCTGTTGATTTTGTCTTGGCCGCTTGGTTTATCTACATTGATTATATGCACTGTATTGTCAGCAGTTATGCTACACTATGGaagGTATCAGAAGAAGGCTGCAAAGTTGATCCAAGAAGTCACTGCTTCTGCAAATGAAGTAGCTCAGGAGACATTCTCTCTCATTAGGACTGTCCGAGTTCATGGAACAGAAAGAGAAGAACTAGGAAGATACAAATGGTGGCTGAGGAAATTAGCTGATATAAGCTTGCGGCAAAGTGCTGCTTATGGATTTTGGAATTTTAGTTTCAACACTCTTTATCATTCAACTCAGGTTATTGCTGTGCTGTTTGGAGGAATGTCCATTCTAGCAGGAGTAAAGTTGCAGAGACTAATGGGGCACGTCGAGTTTATAAATGTTTCCTTTCACTATCCTTCAAGGCCATCGGCATCTGTGGTGCAATATGTAAGCTTTGTTGTTCATCCTGGTGAAGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCGTCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCTACCCTCTCAAAGAATTGGACATCACATGGTGGAGAGAAAGAATTGGATATGTGGGACAGGAACCAAAGCTCTTCCGCATGGATATTAGTTCAAACATCAGATATGGATGCACTCGAGATATAAAACAGGAGGATGTTGAATGGGCTGCCAAGCAGGCTTATGCTCATGACTTCATCTCAGCACTTCCTAATGGTTATGAAACACTTGTTGATAATGATCTCTTAAGTGGGGGACAAAAGCAGCGAATTGCCATTGCAAGAGCCATTCTTAGGGACCCAACAATTTTGGTCCTTGATGAAGCCACCAGTGCTCTGGATGCTGAGAGTGAATATAACGTCAAGGGTGTTCTTCGATCTGTGAGAGGAGACTCCTCTCCAAGGAGAAGCGTGGTAGTCATTGCACACAGGCTTTCTACCATACAAGCAGCTGACAGGATTATGGTAATGGATGGTGGTCAAGTTGTTGAGCACATAATTCACAGTTATGAACTACTTCCAGTAGAGAGTTATGAGTCTGTAGCTCTGTACAAGCTTGGCCTATTGGAGCACAGTGAGAGAAAACCCAGAAGGAAAGGAGGTATTGGAGCTAAGGCATCTCCAGAATTCAGCTTGCTAGTTCATGAAGGGGGCCAAAAGGAGTTGTATGAGCATGCAGTTCCTGCATCAAAGTTGATGGACAAATATCCTGGAATGTGCGTTGCCCTGCCACAAGTGTTCAAAGATCCTCACCAGTCAGTACTGTGGCCAGAAGAGATTCTATTGCCTGGTCACAAGTATATTATAATCTCATGCAAAGCCGTGGAGAAGCTAAAGCGTAAATATCCAGAAGAAACCAAAACCCTACTGGAAAACCAAGTGGATGAGAATGGTACAATAATCCAAGTGCCTAACGTACATGAGATTTTTGAGGCATCTCCACGCAAAACACAAGAGGAAAACAGAGTAAATGTAGAGGAATCGATTTGTATGGATAATTGGGAATTGCGTCCAAGGCGAAAAGGAATCAAAGGGAAGAAGCCTTTCGTGCCGCCTCTTCCAAAGGAAAAATCTTTTCGGAATTTGGGATGGCACCCCAGCCTGTGTACTGTGGAAGAGCTATCCCTATGA 2541 0.4353 MALFHAAYPPRLLSSIRHEYRNNIFIRVSHQRFHFAANTRIQLVLSTPAFSSRRILVSPPKSSPISGVSVQNDIDTLNEGHREDKENVEFLERLRRWVGFLPSILPGGSWWDFSDDAEVQVSAKPVTVWRALTKMWELVAQDRWVIFAAFSTLILAAVSEISIPHFLTASIFSAQGAEIAVFRRNVRLLVLLCITSGICSGIRGCCFGIANMILFITSSCFLHLVKRMRETLYSSLLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNMIFRNILQGTGALIYLLILSWPLGLSTLIICTVLSAVMLHYGRYQKKAAKLIQEVTASANEVAQETFSLIRTVRVHGTEREELGRYKWWLRKLADISLRQSAAYGFWNFSFNTLYHSTQVIAVLFGGMSILAGVKLQRLMGHVEFINVSFHYPSRPSASVVQYVSFVVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGYPLKELDITWWRERIGYVGQEPKLFRMDISSNIRYGCTRDIKQEDVEWAAKQAYAHDFISALPNGYETLVDNDLLSGGQKQRIAIARAILRDPTILVLDEATSALDAESEYNVKGVLRSVRGDSSPRRSVVVIAHRLSTIQAADRIMVMDGGQVVEHIIHSYELLPVESYESVALYKLGLLEHSERKPRRKGGIGAKASPEFSLLVHEGGQKELYEHAVPASKLMDKYPGMCVALPQVFKDPHQSVLWPEEILLPGHKYIIISCKAVEKLKRKYPEETKTLLENQVDENGTIIQVPNVHEIFEASPRKTQEENRVNVEESICMDNWELRPRRKGIKGKKPFVPPLPKEKSFRNLGWHPSLCTVEELSL 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4281 846 SMART AAA_5 442 631 IPR003593 -
Sto6g4281 846 Pfam PADRE domain 677 843 IPR025322 -
Sto6g4281 846 Gene3D ABC transporter type 1, transmembrane domain 133 403 IPR036640 GO:0005524|GO:0016021
Sto6g4281 846 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 415 654 IPR003439 GO:0005524
Sto6g4281 846 SUPERFAMILY ABC transporter transmembrane region 135 565 IPR036640 GO:0005524|GO:0016021
Sto6g4281 846 Pfam ABC transporter transmembrane region 178 424 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g4281 846 CDD ABC_6TM_TAP 149 405 - -
Sto6g4281 846 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524
Sto6g4281 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 635 IPR027417 -
Sto6g4281 846 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 404 643 - -
Sto6g4281 846 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 87 405 - -
Sto6g4281 846 Pfam ABC transporter 435 581 IPR003439 GO:0005524
Sto6g4281 846 PANTHER ABC TRANSPORTER B FAMILY 404 643 - -
Sto6g4281 846 PANTHER ABC TRANSPORTER B FAMILY 87 405 - -
Sto6g4281 846 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 147 405 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g4281 846 Gene3D - 413 635 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4281 Sto-Chr6 45681760 45690129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4281 223 642 Calmodulin-binding Proteins AT2G36910 32.298 5.35e-56 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4281 - - gmx:100775951 893.649