Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4266 ATGAATTCGTCGGAAGCAGAAATGGAATTGGAGGAGGAaataggaggaggaggagggatgAAAATGGGAGAAATGATGGTGGTTCAGGGGGGGAGGAATAGCAACAGTAAGGCAAGGTATAAGGAGTGCCTGAAGAATCACGCGGTGAGCATCGGGGGTCTGGCTCACGACGGTTGTGGCGAGTTCCTTCCAGCTGGAGCGGAAGGCACGCTGGACGCCCTCAAATGCGCTGCTTGTAACTGCCACCGCAATTTCCACCGCAAAGAAACGGACAGCCTCGGGGAGCCCTATCTGTTGACCCACCCACAGCCGCATTTCTCGGCGTATTACCGGGCGGCGCCCGCCGGGTATTTGCAGGCGAGGCTGGCGTTACCGTCGACGTCAGGAGGGGGTGGGACCCAGAGCACGAGAGAGGATCAAGAGGACGTGTCGAACCCcagtggaggaggaggagatggGTCGAAGAAGAGGTTCAGGACAAAGTTCACACAGGAGCAAAAGGACAAGATGCTGGCTTTAGCGGAGAGGCTGGGTTGGAGGATCCAGAAGCACGACGAAGCGGTGGTCCAGCACTTCTGCAACGACACGGGTGTCAAGCGTCATGTTCTTAAGGTTTGGATGCATAACAACAAGCACACTCTTGTAATCCACTTTGATGGACAAAGGTGCATGCAACTTTTGTCAACAATATCTCCAGCCACAGCCATCaatataatggaagattcaGACCTGAAAGTAGATTCTGATTCTACAAGGATCCCATGA 765 0.4993 MNSSEAEMELEEEIGGGGGMKMGEMMVVQGGRNSNSKARYKECLKNHAVSIGGLAHDGCGEFLPAGAEGTLDALKCAACNCHRNFHRKETDSLGEPYLLTHPQPHFSAYYRAAPAGYLQARLALPSTSGGGGTQSTREDQEDVSNPSGGGGDGSKKRFRTKFTQEQKDKMLALAERLGWRIQKHDEAVVQHFCNDTGVKRHVLKVWMHNNKHTLVIHFDGQRCMQLLSTISPATAINIMEDSDLKVDSDSTRIP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4266 254 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 39 89 IPR006456 -
Sto6g4266 254 MobiDBLite consensus disorder prediction 126 143 - -
Sto6g4266 254 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 31 214 - -
Sto6g4266 254 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 40 89 IPR006456 -
Sto6g4266 254 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 31 214 - -
Sto6g4266 254 SUPERFAMILY Homeodomain-like 145 213 IPR009057 -
Sto6g4266 254 MobiDBLite consensus disorder prediction 124 158 - -
Sto6g4266 254 Gene3D - 140 215 - -
Sto6g4266 254 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 155 211 IPR006455 -
Sto6g4266 254 Pfam ZF-HD protein dimerisation region 38 90 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4266 Sto-Chr6 45609759 45612015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4266 36 214 ZF-HD Transcription Factor Family AT4G24660 58.919 2.07e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sto6g4266 ZF-HD_dimer 3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4266 - - csv:101204784 278.1