Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4244 ATGGGATCATTAAATAAGCATGGAAGAGAGTTATGTTCGGATGAGGAGCCATCCCCAAGAGGTGTACTGGAAATGCCTGTTTTAGGTAGAGAGTCAGACCATAGTGCAAGCAGCAGCTGCCGTTCGAGCTCGCCGGAGAAGGCAGCGTTGGGGCGGGAATGTCACGGACAGCAGCAATGGAAGTCAATGATAGAATCACTGAGGAAGAAGTCAGTGCAGAAAATAGCAACGATTCCATTGCTTGCGGCGAGCTACGAGATGTCAAGGAAGAGCTTGAGGAGGAGGAGAGTAGGACGTATTCGAAGCGCAGAAGACAGTATTCATCTTGGGGCTGTTCCTACAAAACCCTCTTGGAGGAGCTTCGATTACGCAGAGCTACAAGCTGCTACAGATAATTTCAGCCCTGAGAACCAGATTGGGCGAGGTGGTCATGCCGTAGTGTACAAAGGACGGTTAGCGGATGGTCAAGTGGTAGCAGTAAAAAGGTTAATGAAGGAAGTGAAGGATAAGGAGGACAGAGCGGGTGATTTCTTGTCAGAGCTTGGAATAATTGCGCACATAAACCACCCAAATGCTGTGCGTTTGATTGGGTTCGGGGTCAACGACGGTCTCTACTTTGTCCTCCAATTCGCCCCACACGGCAGCCTTTCTTCCCTCCTTTTTGGTTCTCAATGCATGGACTGGAATTTAAGGTTCCGGGTAGCTGTTGGGGTGGCAAACGGCTTGAAGTACCTCCATCATGATTGCCCAAGACGAATCATCCACAGAGACATCAAAGCCTCAAACATATTACTGAACAGCAATTTCGAAGCTGAGATTTCAGATTTTGGACTGGCAAAATGGCTCCCAGATAAGTGGAGCCAACATGTTGTTTTCCCTATTGAGGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGAATTGTGGATGAGAAGACTGACGTATTCGCATTTGGGGTTCTGCTACTGGAGCTCATAACAGGTCGTCGTGCAGTTGATTCATGTAGCAGACAGAGTCTTGTTCTCTGGGCAAAACCACTGCTGCAAGATAACAATGTGAACGAATTAGTAGACCCCAGATTAGGAGAATCTTATGATTCTACTGAAATGACGCGTGTCATGTTTACTGCTTCCTTGTGTGTCCACCACTTATCCTCCGACCGCCCATACATGGGTCAGGTTGTGCATCTGCTGAGGGGCGAAGAGGCATTTATTGATATTAAGCAAAAATCATCGACGATCAGATCGCTCATGTTAGATGCGGGTGACCTTGAAGAGTATACTTGCTCAAATTACTTGAGAGATCTCAATCGTCATAGGCAACTAGTCATGGAGTGA 1344 0.4732 MGSLNKHGRELCSDEEPSPRGVLEMPVLGRESDHSASSSCRSSSPEKAALGRECHGQQQWKSMIESLRKKSVQKIATIPLLAASYEMSRKSLRRRRVGRIRSAEDSIHLGAVPTKPSWRSFDYAELQAATDNFSPENQIGRGGHAVVYKGRLADGQVVAVKRLMKEVKDKEDRAGDFLSELGIIAHINHPNAVRLIGFGVNDGLYFVLQFAPHGSLSSLLFGSQCMDWNLRFRVAVGVANGLKYLHHDCPRRIIHRDIKASNILLNSNFEAEISDFGLAKWLPDKWSQHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSCSRQSLVLWAKPLLQDNNVNELVDPRLGESYDSTEMTRVMFTASLCVHHLSSDRPYMGQVVHLLRGEEAFIDIKQKSSTIRSLMLDAGDLEEYTCSNYLRDLNRHRQLVME 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4244 447 Gene3D Transferase(Phosphotransferase) domain 1 212 418 - -
Sto6g4244 447 Gene3D Phosphorylase Kinase; domain 1 108 208 - -
Sto6g4244 447 SMART serkin_6 133 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4244 447 Pfam Protein kinase domain 135 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4244 447 MobiDBLite consensus disorder prediction 1 53 - -
Sto6g4244 447 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 8 447 - -
Sto6g4244 447 PANTHER OS08G0249100 PROTEIN 8 447 - -
Sto6g4244 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Sto6g4244 447 SUPERFAMILY Protein kinase-like (PK-like) 114 400 IPR011009 -
Sto6g4244 447 ProSitePatterns Protein kinases ATP-binding region signature. 139 161 IPR017441 GO:0005524
Sto6g4244 447 ProSiteProfiles Protein kinase domain profile. 133 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4244 Sto-Chr6 45481567 45484559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4244 99 430 Trihelix Transcription Factor Family AT1G70460 42.690 3.88e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto6g4244 Pkinase 7.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4244 - - gmx:100818314 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4244 6 45481567 45484559 Sto11g1222 11 12105282 12108301 CCT