Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4237 ATGGACACTCaaaatcaatccaagcctaCAGCAGGACAAAAAGCGATGTTTCCTCCACCTCCAGGAACTTTCCATGACCGTGAAGATCTCATTAAATATGTTCGTGATTTTGGTGCCGATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGACAGAAGAATCATCCTTGGCTGTGACAGAGGTGGTGTCTATCGTAATAGGCGCAAAACTGATGAAAGTAAGCGCAAAAGAAAAGCAACTTCGCGCCTTATAAATTGTCCCTTTGAAGCCATTGGTAAAAAGGAAGATGATGTATGGGTACTTACTATAAAAAATGGGGATCACAATCATGAACCCTTGAAAGACATGTCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTGAGACAAATCAAACTAATGACTGAGGCTGGTGTGAAACCTCGTCAAGTGCTTAAAACTCTTAAACAAAGCAATCCTGAACTGCAGTCAACACCAAGGCACTTGTACAATCTCAAAGCAAAGATTCGTCACAGAAATCTGCCAGAGAAAACTTTCAAGTCATGGACACCAAATagatctttccctgttgggatAAACAATACTCCATCTGGTGGTTCAGCAATGCAAAGCAACCACCCGCTGAAGGTTCCTAATTTTATTGGGGGGAGATATGTAGATTCTCAAGGTTGTGGATTTCTTGATGTTACAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCCTTTAACTACATATGAAGATTTCAAAACTGCAGTTAGTGCAGCCAAGCAAGCTTTCCCTTCATGGAAAAACACACCTATCACCAAACGACAGCGTGTTATGTTTAAGCTCCAGGAGCTTATTCGCAGAGATATAGACAAGTTTGCCATGAATATCACCATAGAGCAGGGTAAGACATTAAAAGGTGCTCAAGGAGATGTGCTCCGTGGTTTAGAGGTGGTGGAGCAAGCTTGTGGGATGGCACATCTGCAAATGGGGGAATTTGTGCCTAATGCTTGTGATGGAATTGATACATACTGCATCAGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCTTGAACTTTCCAGCAATGATACCCTTGTGGATGTTCCCTATTGCGGTTACATGTGGCAACACATTTATTCTCAAGCCATCTGAGAAAAATCCAGGGGCTTCAATGATACTTGCAGCATTAGCAATGGAAGCGGGTTTACCAGATGGTGTATTAAATGTTGTTCATGGTACCCATGAGATTGTTGACTACATATGTGATGATGGGGATATAAAAGCTGTATCATTTGTGGGCCCAATCGCGGCTGGAATTGACGTATATGCCAGGGCTGCTGCTAGAACAAAACGTGTCCAGTCCATTACAGGTGGCAAAAATCATGCAATTGTTATGCCCGATGCTAGCATGGATGCTACCATAGATGCTCTTATTGCTGCTTCCTTTGGTGCAGCAGGAGAGAGGTGCATGACTCTAAGCACGGCTATTTTTGTTGGGGGATCAGTACCATGGGAAAAAGAACTTGTACAGCGTGCCAAGGTACTTAAAGTGAATGCAGGAACAGATCCTATTGCTGACCTTGGTCCAGTTATTAGCAAAGAGGCAAAggatcaaatatataaattagttcAGAGCAGTGTCGAAAACGGTGCAAGGCTTCTGCTTGATGGAAGATATATAGTGGTACCAGGATATGAGAATGGAAATTTTGTTGCtcctactatcatatgtgatgttACAACCAATATGGAGTGCTACAAGGAAGAAAATTTTGGACCAGTTCTCCTCTGCATGCAGGCTCATAACCTAGATGAGGCAATATCAATAATCAACAAAAACATGTATGTAAATGGAGCCACCATATTTACCACATCTGGTGTAGCTGCTAGGAAGTTCCAGAATGAGGTTGAGGCTGGTCTGGTTGGGGTCAATGTTGCTGTTCCTGTTTGCTTACCATTTTCCTCCTTCAATGGGTCAAAGTCATCTTTTATTGGTGATCTCAATTCTTGTGGAAAGGAAGGAGTGCAGTTTTATACCCAAATAAAAACAGTTGCACAACAATGGAAGGAGTCCCCTAGGCTAGGGATGTTGCCTTCTGCATGTCCATCTGAGACAGATAGAACCAATAGATATGCCTCTTCCACAGCGCCTCCAACATCCGACAGACATTCACCTAGAGAAATAGCGCCACAAGTCATGCTTTTAGAAACTGAGAGTGATTCACCAACACACCATGCACAAATTGCCATTCCGGATACTGATATTGAGATCACGGCCATATGTTCTGCTTCGCCGATAACTTGTAAGGGTCTTGGAAGACAAGGCATGTCCCTAGTTCTGCCTTCAAAATCCGAGAGGGACATGGCTGATCAGGATATGTCACTGGCATCTCAGAGGGACATAACAAGCCGAGCGGTGTCCGTGGCCACACCCCAGACATCAGAGAGGTTGTACTTTTCTAAAACATCACAGTGGAATGAAAGTTCGTCGTCTTCAACATCTCAAAGGATTGAAACTATCCAACCAACTTCTGAGAGGAGTCACGTGCCTACTTCTCAGAGGAATGGAAATATATCACCAGCATCTTATAAAACCGATATTACCATAGCTTCACAATCAGAGAGGGCGTACATGCCTATGACCCATAAAATAGATAACATCGGTTCGTCCCACCAGATAGACGCAGCTGTGCATTCTACTTCTGAAAGGGTGTATGTATTAGCAGCATCTCATTTGAATGAGAATACTGGTCGAACATTTGAAAAAGCTGAGCCCATGTTTCCAACTTCTGAGAGGATATATATGCCTGCAACGTCTCAAAGGAGTGACCTTGTAGGCTCAGGATCCCACAGTATTGACATTGGCTTAGGTCCAACCTCAGAGAGGATATATATATCTGCAGCATCtcatagaaatgaaaatattaatgcAGCTTCCCAGCTTGGCGATTCTTTGCCTGCAACTTCTGAGAGGGCCTTCTTGCCGCCAATAGTGCAGAATATGCCGCCGGCAAGCTCGGAGAGGTTATATATACCAACTAATTCTCAAAGGATGTATAATCGAAACCCAATAATTTCAATGGATGAATTTCCCAGCCAAGCTGCGGCTATGACTTTGCCAACATCTCAGAGGATATAA 3144 0.4218 MDTQNQSKPTAGQKAMFPPPPGTFHDREDLIKYVRDFGADQGYVVTIKKSRKDRRIILGCDRGGVYRNRRKTDESKRKRKATSRLINCPFEAIGKKEDDVWVLTIKNGDHNHEPLKDMSEHPYSRRFTEEEVRQIKLMTEAGVKPRQVLKTLKQSNPELQSTPRHLYNLKAKIRHRNLPEKTFKSWTPNRSFPVGINNTPSGGSAMQSNHPLKVPNFIGGRYVDSQGCGFLDVTNPATQEVVSQVPLTTYEDFKTAVSAAKQAFPSWKNTPITKRQRVMFKLQELIRRDIDKFAMNITIEQGKTLKGAQGDVLRGLEVVEQACGMAHLQMGEFVPNACDGIDTYCIREPLGVCAGICPLNFPAMIPLWMFPIAVTCGNTFILKPSEKNPGASMILAALAMEAGLPDGVLNVVHGTHEIVDYICDDGDIKAVSFVGPIAAGIDVYARAAARTKRVQSITGGKNHAIVMPDASMDATIDALIAASFGAAGERCMTLSTAIFVGGSVPWEKELVQRAKVLKVNAGTDPIADLGPVISKEAKDQIYKLVQSSVENGARLLLDGRYIVVPGYENGNFVAPTIICDVTTNMECYKEENFGPVLLCMQAHNLDEAISIINKNMYVNGATIFTTSGVAARKFQNEVEAGLVGVNVAVPVCLPFSSFNGSKSSFIGDLNSCGKEGVQFYTQIKTVAQQWKESPRLGMLPSACPSETDRTNRYASSTAPPTSDRHSPREIAPQVMLLETESDSPTHHAQIAIPDTDIEITAICSASPITCKGLGRQGMSLVLPSKSERDMADQDMSLASQRDITSRAVSVATPQTSERLYFSKTSQWNESSSSSTSQRIETIQPTSERSHVPTSQRNGNISPASYKTDITIASQSERAYMPMTHKIDNIGSSHQIDAAVHSTSERVYVLAASHLNENTGRTFEKAEPMFPTSERIYMPATSQRSDLVGSGSHSIDIGLGPTSERIYISAASHRNENINAASQLGDSLPATSERAFLPPIVQNMPPASSERLYIPTNSQRMYNRNPIISMDEFPSQAAAMTLPTSQRI 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4237 1047 Pfam Aldehyde dehydrogenase family 222 686 IPR015590 GO:0016491
Sto6g4237 1047 MobiDBLite consensus disorder prediction 704 723 - -
Sto6g4237 1047 MobiDBLite consensus disorder prediction 1 25 - -
Sto6g4237 1047 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 215 690 IPR010061 GO:0004491
Sto6g4237 1047 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 1 1046 - -
Sto6g4237 1047 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 233 667 IPR016162 GO:0016491
Sto6g4237 1047 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 459 659 IPR016163 GO:0016620
Sto6g4237 1047 MobiDBLite consensus disorder prediction 823 864 - -
Sto6g4237 1047 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 1046 IPR010061 GO:0004491
Sto6g4237 1047 CDD ALDH_F6_MMSDH 214 690 IPR010061 GO:0004491
Sto6g4237 1047 SUPERFAMILY ALDH-like 207 691 IPR016161 GO:0016491
Sto6g4237 1047 MobiDBLite consensus disorder prediction 700 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4237 Sto-Chr6 45435449 45443718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4237 207 674 Aldehyde Dehydrogenase Gene Family AT2G14170 70.513 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto6g4237 Aldedh 1.1e-126 CL0099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4237 K00140 - qsu:111997886 1446.03