Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4223 ATGTGTGCTAAGGTAGCAGATTTTGGTTTCTCAAAGTATGCTCCTCAGGAAGGAGATAGTGGTGCTTCTCTTGAAGTGAGAGGAACCGCAGGATATATGGATCCTGAGTACTACACAACCCAGCAATTATCTGCAAAAAGTGATGTCTTCAGTTTCGGCGTGGTTCTACTTGAAATTGTCAGTGGCCGGGAACCTCTCAACATACATAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGGGCATCAAAGATCGATGAAATTGTGGATCCTGGCATCAAGGGAGGATATCATGCGGAGGCTATGTGGAGAGTGGTGGAGATAGCACTGTCATGTATTGAACCATTCTCAGCATATCGACCAAGCATGGTCGACATTGTCCGAGAGTTGGAGGATGCTCTAATTATAGAAAACAATGCATCAGAATACATGAAGTCCATTGAAAGCCTTGGAGGATCCAATCGCTACTCCATTGTTATAGAGAAAAGGGCGGTACCTCCAACTTCGTCTACAACAGAATCAACCATGTCAAGCAAAACCTTGTCCCTCCCACAGCCGAGATAG 579 0.4508 MCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKPYIRASKIDEIVDPGIKGGYHAEAMWRVVEIALSCIEPFSAYRPSMVDIVRELEDALIIENNASEYMKSIESLGGSNRYSIVIEKRAVPPTSSTTESTMSSKTLSLPQPR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4223 192 Pfam Protein tyrosine and serine/threonine kinase 2 135 IPR001245 GO:0004672|GO:0006468
Sto6g4223 192 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Sto6g4223 192 SUPERFAMILY Protein kinase-like (PK-like) 2 137 IPR011009 -
Sto6g4223 192 MobiDBLite consensus disorder prediction 172 192 - -
Sto6g4223 192 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4223 192 PANTHER OS05G0525400 PROTEIN 2 153 - -
Sto6g4223 192 PANTHER OS07G0107800 PROTEIN-RELATED 2 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4223 Sto-Chr6 45353024 45353896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4223 3 171 Receptor kinase-like Gene Family AT2G28970 42.012 8.94e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto6g4223 PK_Tyr_Ser-Thr 3.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4223 - - aip:107642298 337.035