Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4222 ATGCAGAGGCTGAAATCTCATACCCCATCGGATCGGATTACTGCTTTGATTAATTTGGTTGCACACTCTATTGTTTCTACTGCTTTAACCATTGCACAACCAGGGTCTCCAGGTAAAGATGAGCTTGCAATTGCACAGAAACCTTTTGTAACAAACACAACTAAACCAGAATCATGTGCACGCTCAATTTTCTTCTCTGAAGAAACTGTGCTTATAGGGGGGCTTGAGTTTTCAGGCCTCACCTACACAGTGACAAAGCAGAAGAAGGTTGGTGGGAGCTGGGTGAAGGAGGATGTGGATTTGCTTCATCAAATTACTGGCTATGCACCAAAGGGTTGTATCACTGCAGTGATGGGTCCCAGTGGAGCAGGGAAGTCAACGTTTTTGGATGGGCTTGCTGGCAGAATTGCTAGTGGGAGCCTGAGGGGAAGAGTGTCGTTGGATGGCACAGACACCACTCCTAGCTTGATCAAAAGAACTTCTGCTTATATCATGCAGGATGATAGGCTTTTTCCAATGCTCACTGTCTATGAAACTTTCATGTTTGCTGCTGACTTCAGACTTGGCCCACTTTCTCTTGCTGATAAGAAGCACAGAGTTGAAAAGCTCATTGACCAGCTTGGCTTATCTTCAACTAGGAACACGTACATAGGAGATGAAGGGACAAGAGGGGTGTCTGGTGGAGAGAGACGTCGAGTCTCAATTGGAGTGGACATCATCCACGGACCATCACTGCTGTTTCTGGATGAGCCCACATCGGGTCTAGACTCCACCAGTGCACACAGCGTGATCGAGAAGGTGCACGACATCGCACGCAGCGGCAGCACCGTGATTCTGACCATCCACCAGCCATCCTCCAGAATCCAACTGCTTCTGGACCACCTCATCATCTTGGCCAGAGGGAAGCTCATGTTTCAAGGCTCTCCCAAAGACGTTGCCCTCCATTTGGGCCGCATGGGAAGAAAGGTGCCAAAGGGAGAGAACCCCATTGAGCATctcattgatgtgatccaagaATATGATCAGTGCGAGGTTGGAGTTGGAGCACTGGCTGAGTTTGCACGTACGGGAATGAAGCCTCCTCCTCTGTCTCACCACCAATTCTCTCTTTCTACTGTGCCACCTACTCCAACCCACCCTAATAAATCTCACGAATTCTCTCACTCCCATGTAAGTAGGCGTGACCTCGACGATTTTGATCACAGTCTGAGAAGCCCCCATACACCCAGGTCCTGGAGTGCCACCAACAGTGGAGTATTTCGAAAGTTCACACCTTCACGACTAAAGAATGACCACAAAGTGCAGAATCCTATCAGCATCAACGCATCCCCTGGCTACTACACATACTCAAGCGAGATACTGCCAGCCACTCCAACGCCTCACAGTAGCGACTACACAGTGAATGAGAACGACTACCTCACTCCTGCAGAAGGGCTTACCAGACATCTGGGCCCCAAATTTGCAAACTCGTTCTTGCAGGAGACTTGGATCCTCATGCGTCGGAACTTCATCAACATCCGTCGAACCCCTGAGCTCTTCCTCTCTAGACTAATGGTGCTTACAGTGATGGGCTTCATGATGGCCACCATGTTCAAGAACCCCAAAGCTGACCTCCAAGGAATCACCAACCGCCTCAGTTTCTTCATCTTCACCGTttgcctcttcttcttctcgtccAATGACGCCGTGCCGGCCTTCATCCAGGAGCGCTTCATTTTCATCAGGGAGACTTCCCACAACGCCTACCGAGCCTCCTCCTACACCATCGCTGGCCTAATCACCCACACTCCCTTTCTTGCTCTCCAAGCAACTGTCTACGCACTCCTCGTTTGGTTTGCTTTAAAGCTCCAAGGCCCTTTTCTCTACTTCGTGCTTGTTCTCTTCGTTTCCCTCGTCACTACCAACTCCTTTGTTGTTTTCGTAAGCTCTGTGGTTCCCAATTATATCCTGGGTTATGCTGCTGTTATTGCTTTCACTGCTctcttcttcttgttttgtggGTATTTCTTGAGTAGCAAGGACATTCCTGTGTACTGGCGATGGATGAACAAAGTTTCAACTATGACGTATCCTTATGAGGGGCTCTTGATGAACCAATATCAGACTTTTGAAGTGTTTGGGACAAACCTGGATGGCTCACAAGTTAGAGGTTTTGATATCTTGAGTAGCCTTCATATTAGTACTGAAGAGTCAAAGAAGTGGAAAAATGTGATCATAATGTTGATCTGGGCTGTGCTCTATAGGATTTTGTTTTACTTGATCCTTCGTTTTGCATCCAAAAACCAGAGGTCTTAA 2295 0.468 MQRLKSHTPSDRITALINLVAHSIVSTALTIAQPGSPGKDELAIAQKPFVTNTTKPESCARSIFFSEETVLIGGLEFSGLTYTVTKQKKVGGSWVKEDVDLLHQITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIASGSLRGRVSLDGTDTTPSLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLSLADKKHRVEKLIDQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQLLLDHLIILARGKLMFQGSPKDVALHLGRMGRKVPKGENPIEHLIDVIQEYDQCEVGVGALAEFARTGMKPPPLSHHQFSLSTVPPTPTHPNKSHEFSHSHVSRRDLDDFDHSLRSPHTPRSWSATNSGVFRKFTPSRLKNDHKVQNPISINASPGYYTYSSEILPATPTPHSSDYTVNENDYLTPAEGLTRHLGPKFANSFLQETWILMRRNFINIRRTPELFLSRLMVLTVMGFMMATMFKNPKADLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGLITHTPFLALQATVYALLVWFALKLQGPFLYFVLVLFVSLVTTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPVYWRWMNKVSTMTYPYEGLLMNQYQTFEVFGTNLDGSQVRGFDILSSLHISTEESKKWKNVIIMLIWAVLYRILFYLILRFASKNQRS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4222 764 Pfam ABC-2 type transporter 494 700 IPR013525 GO:0016020|GO:0140359
Sto6g4222 764 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 325 IPR003439 GO:0005524
Sto6g4222 764 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 66 758 - -
Sto6g4222 764 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524
Sto6g4222 764 CDD ABCG_EPDR 75 307 - -
Sto6g4222 764 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 758 - -
Sto6g4222 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 315 IPR027417 -
Sto6g4222 764 MobiDBLite consensus disorder prediction 362 392 - -
Sto6g4222 764 Pfam ABC-2 type transporter 282 339 IPR043926 GO:0140359
Sto6g4222 764 Gene3D - 75 319 IPR027417 -
Sto6g4222 764 SMART AAA_5 111 309 IPR003593 -
Sto6g4222 764 Pfam ABC transporter 102 253 IPR003439 GO:0005524
Sto6g4222 764 MobiDBLite consensus disorder prediction 365 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4222 Sto-Chr6 45339610 45344977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4222 96 339 Calmodulin-binding Proteins AT2G36910 25.506 8.43e-10 60.8