Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4198 aTGAATCTGTGGACTGACGATAACTCCTCCGTCATGGAGGCTTTCATGACTTCCGATCTTTCTGCTCTCTGGCCTACTACTCCTCACCCCCAATCCTGTGCTTCTACCAccactcctcctcctcctcctcctccctccAAACCTCTCTTCAATCAGGATACTCTCCAGCAGCGCCTCCAGGCCCTCATTGAAGGCGCCCCAGAGTGCTGGACCTACGCTATCTTCTGGCAATCCTCCTCCGATTACTCCGGAGCCTCCGTCTTGGGCTGGGGCGATGGCTACTACAAAGGTGAGGAAGATAAAGGCAAATCCAAGGCCAAAACCCTCTCCTCCGCCGCCGAGCAGGATCACCGCAAGAAGGTTCTTCGGGAGCTCAATTCCCTCATCTCCGGATCCTCTGCCCCCTCCGACGACGCCGTCGACGAAGAAGTCACCGACACCGAGTGGTTCTTCCTCATTTCCATGACCCAATCCTTTGTTAACGGCGACGGCTTACCCGGTCAGGCCTTTTACACTTCCACTCCCGTGTGGTTGACCGGCGGGGAGAGGTTATCCAGTTGCAGTTGCGAGAGGGCGAGGCAGGGGCTAGGGTTCGGCCTTCGGACCTTGGTCTGCATACCGTCGGCGAATGGGGTGGTGGAGTTGGGGTCAACGGAGCTCATCTTCCAGAACTCGGATCTGATGAATAAGGTGAAGGTTTTGTTCAATTTCAGCAACCCAGAAGCCAATTCCTGGCCCCTCACCACCGATCAAGGCGAGAACGACCCTTCCTCGCTTTGGATTAATGATCCATCTACTGGAATTGAAATCAGAGATTCCGCCAACACTACTCTTCCATCCTCTAATACTATTCACACGAGTACCAAACCCATGCAATTCGACACTCCAGGTTCTAGTACTCTAACTGAAGCAGCCCCTAGCGTGGTTCATATCCCCAACAATCATTACACTCACCAGCCACAACAATCGCAGCAGCAGAACCAAGGGTTCTTTACCAGGGAACTGAACTTCTCGGAATACGGCTTCGAGGCAAATAGCTTAAAGAACGGGAATTCGCATTCCTTGAAGCCGGAATCGGGTGAGATTTTGAACTTTGGGGAGAGCAAGAGGAGCTCTTATAGTGGAAATGGGAATTTCTTTTCAGGTCAGAGTCCCTTCGCCGCAGAGGATCACAAGAAGAGGAGGTCCCCTACTTCCAGGGGTAGTAATGACGAAGGAATGCTTTCCTTCACTTCCGGTGTCATTTTGCCCTCTTCCAACATCAAGTCCAGCGCCGGCGGGGATTCCGACCACTCGGATCTTGAAGCTTCCGTGGTGAAGGAAGCAGATAGTAGCAGAGTGGTGGAACCAGAAAAACGGCCCCGTAAAAGAGGACGAAAGCCAGCAAATGGCAGAGAGGAGCCTCTGAATCACGTTGAAGCAGAGAGGCAGAGGAGAGAGAAGCTGAATCAGAGGTTCTACGCACTTCGTGCAGTGGTTCCCAACGTGTCGAAGATGGACAAAGCGTCTCTGCTGGGCGACGCCATATCTTACATTAACGAGCTCAAGTCGAAGCTTCAGAACTTGGAATCAAACAAAGAGGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGGAGCTGGAGGTGGTGGTCAGTAATAAGGATTCGCGTGCACCTCCATCAGATAAAGAACACAAGAGCAATGGAAGCGGGAAGCTAATTGACTTGGATATCGACGTGAAGATCATAGGTTGGGATGCAATGATTCGGATCCAATGTAGTAAGAAGAATCACCCCGCAGCGAGGTTAATGGCAGCTTTGATGGAGCTAGACCTGGATGTGCATCACGCGAGTGTGTCGGTGGTGAATGATCTAATGATCCAACAGGCCACAGTGAAGATGGGAAGTCGATTTTACACGCAGGAGCAGCTGAGCCAGACGCTTCAAAGGACAAATTCCCATAGGGAGTGTGCCCCAGAAAACCGTAGCCTGAGGAAAGCGCGTAGTTTGCAGGTGGACAGAAGCTGGGCAGGGAATATGGCTCCACCAACGGATTGTaaagaaagaagaggtggaCCAATGGCCATCATCAAGAGAGAACATCGCCGCGTTCACAGCGCTGGAAGTGATGCTTATTCCAACAGCCATGAGCCAAGACTGGTAAGGAGCCCTGGGATGAGAAGAGACTGGAGTTTTGAGAATTTGGCTGACAAGAATGAGGACACAGTCATATAG 2214 0.505 MNLWTDDNSSVMEAFMTSDLSALWPTTPHPQSCASTTTPPPPPPPSKPLFNQDTLQQRLQALIEGAPECWTYAIFWQSSSDYSGASVLGWGDGYYKGEEDKGKSKAKTLSSAAEQDHRKKVLRELNSLISGSSAPSDDAVDEEVTDTEWFFLISMTQSFVNGDGLPGQAFYTSTPVWLTGGERLSSCSCERARQGLGFGLRTLVCIPSANGVVELGSTELIFQNSDLMNKVKVLFNFSNPEANSWPLTTDQGENDPSSLWINDPSTGIEIRDSANTTLPSSNTIHTSTKPMQFDTPGSSTLTEAAPSVVHIPNNHYTHQPQQSQQQNQGFFTRELNFSEYGFEANSLKNGNSHSLKPESGEILNFGESKRSSYSGNGNFFSGQSPFAAEDHKKRRSPTSRGSNDEGMLSFTSGVILPSSNIKSSAGGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQNLESNKEDLQKQLDSVKKELEVVVSNKDSRAPPSDKEHKSNGSGKLIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLSQTLQRTNSHRECAPENRSLRKARSLQVDRSWAGNMAPPTDCKERRGGPMAIIKREHRRVHSAGSDAYSNSHEPRLVRSPGMRRDWSFENLADKNEDTVI 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4198 737 MobiDBLite consensus disorder prediction 34 49 - -
Sto6g4198 737 MobiDBLite consensus disorder prediction 648 662 - -
Sto6g4198 737 PANTHER TRANSCRIPTION FACTOR MYC2 6 641 - -
Sto6g4198 737 MobiDBLite consensus disorder prediction 374 476 - -
Sto6g4198 737 PANTHER MYC 6 641 IPR045084 GO:0003700|GO:0006355
Sto6g4198 737 MobiDBLite consensus disorder prediction 401 427 - -
Sto6g4198 737 MobiDBLite consensus disorder prediction 645 664 - -
Sto6g4198 737 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 535 IPR036638 GO:0046983
Sto6g4198 737 SMART finulus 472 521 IPR011598 GO:0046983
Sto6g4198 737 MobiDBLite consensus disorder prediction 26 49 - -
Sto6g4198 737 MobiDBLite consensus disorder prediction 695 715 - -
Sto6g4198 737 CDD bHLH_AtAIB_like 463 539 - -
Sto6g4198 737 MobiDBLite consensus disorder prediction 433 476 - -
Sto6g4198 737 Gene3D - 458 545 IPR036638 GO:0046983
Sto6g4198 737 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Sto6g4198 737 MobiDBLite consensus disorder prediction 276 300 - -
Sto6g4198 737 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 235 IPR025610 -
Sto6g4198 737 Pfam Helix-loop-helix DNA-binding domain 470 515 IPR011598 GO:0046983
Sto6g4198 737 MobiDBLite consensus disorder prediction 544 563 - -
Sto6g4198 737 Coils Coil 505 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4198 Sto-Chr6 45189994 45196338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4198 1 641 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 57.991 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto6g4198 bHLH-MYC_N 4.9e-54 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4198 K13422 - zju:107430586 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4198 6 45189994 45196338 Sto6g4198 6 45189994 45196338 ECH