Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4194 ATGGCGTCAGACACCTTCCACGACAAGAATGCTGTCTTCAGAAAACTCAAGGCAAAGTCCGATAATAAGATGTGTTTCGATTGTAATGCAAAGAATCCTACTTGGGCCTCCGTTACGTATGGGATCTTCCTCTGCATCGATTGCTCTGCTGTTCATCGCAGTCTTGGCGTGCACATCAGCTTTGTCAGATCTACTAATTTAGATTCATGGTCTCCTGAGCAATTGAGAATAATGAGCTTTGGAGGAAACAACCGTGCACATGTTTTCTTCAAGCAACATGGTTGGACTGATGGTGGAAAAATAGAGGCCAAGTATACTTCCAGAGCCGCAGAGTTGTATAGACAAATTCTTTCTAAGGAAGTGGCCAAAAGTATGGCAGAGGAGGCAGGATTACCATCGTCACCTGTTGCTTCTCAGTCGGCACAAGTGGCTAATGGGCTTCCTGAAATTAGGACCAATGATGTACCAAAAGAAAACATTTTGGAGAAGCCAGAAATGACTGAAAGCACTGCTTCACCCAAAGCTTCCCACACAACCATTTCTAGTACAGTCAAGAAACCCATTGGTACCAAAAAAGCTGGCAAGACTGGGGGCCTTGGTGCACGAAAGCTTACTAAAAAGCCAAGCGAGTCTCTATATGAGCAGAAGCCAGAAGAAGCACCTGCTCCAGTTTCTTCCTCAGCAAGCAACACTTTGGCAGCTGGGCCACCCTTAACATCTCGGTTTGAGTATTTAGAAAATGTCCAATCATCTGAGACGAATTCTGGAGGTGCTCATGTGGTTAGTCATGTGTCTCCACCAAAGTCATCGAGCTTTTTTGCAGATTTTGGGATGGATAGTGGCTTCCCAAAGAGGTCTGGGTCAAATTCCTCAAAAGTGCAAGTTGAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCTATATCTTCGGCCCAATTTTTTGGAGATCACAACAAAGCTGCAGATATGGACAGTCGAGCTACTTTGTCAAAGTTCTCGGGTTCAACTGCTATCTCCAGTGCAGATCTTTTTGGTCACTCAGCAGATTCCTCCATTGATCTTACTGCAAGTGACCTCATCAATCGCCTTTCTTTCCAGGCACAGCAGGATATCTCTTCCATCAAAAACATTGCAGGGGAGACTGGGAAGAAGCTCAGTTCCTTGGCATCCTCTTTGATGACAGATCTTCAGGACAGAATCCTCTAA 1215 0.4469 MASDTFHDKNAVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLRIMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEAGLPSSPVASQSAQVANGLPEIRTNDVPKENILEKPEMTESTASPKASHTTISSTVKKPIGTKKAGKTGGLGARKLTKKPSESLYEQKPEEAPAPVSSSASNTLAAGPPLTSRFEYLENVQSSETNSGGAHVVSHVSPPKSSSFFADFGMDSGFPKRSGSNSSKVQVEESDEARKKFSNAKSISSAQFFGDHNKAADMDSRATLSKFSGSTAISSADLFGHSADSSIDLTASDLINRLSFQAQQDISSIKNIAGETGKKLSSLASSLMTDLQDRIL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4194 404 MobiDBLite consensus disorder prediction 133 147 - -
Sto6g4194 404 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Sto6g4194 404 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Sto6g4194 404 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Sto6g4194 404 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 404 - -
Sto6g4194 404 Gene3D Arf GTPase activating protein 1 137 IPR038508 -
Sto6g4194 404 CDD ArfGap_ArfGap2_3_like 8 123 - -
Sto6g4194 404 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 404 - -
Sto6g4194 404 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Sto6g4194 404 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Sto6g4194 404 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Sto6g4194 404 MobiDBLite consensus disorder prediction 130 235 - -
Sto6g4194 404 MobiDBLite consensus disorder prediction 283 306 - -
Sto6g4194 404 Pfam Putative GTPase activating protein for Arf 12 106 IPR001164 GO:0005096
Sto6g4194 404 MobiDBLite consensus disorder prediction 165 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4194 Sto-Chr6 45168447 45173950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4194 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 1.01e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4194 K12493 K11855 gmx:100785169 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4194 6 45168447 45173950 Sto6g4194 6 45168447 45173950 ECH