Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4177 ATGTCAGACCGGAGTTCATTCTCCGGTGACTCACCGGCCGTGGATATGAGGGAGAGAAAGGAGGAAGAGGGGAAAAAACAGAGAAAAGTTCCTCTGTTAAAGCTGTTTTCTTTCGCTGACTCTTATGATTATGTTCTAATGGCAATTGGATCCATTGGGGCATGTGTTCACGGAGCTTCTGTGCCtgttttcttcatcttttttgGAAAGTTGATCAATGTCATAGGCTTGGCTTATCTTTTTCCCAAAGAAGCTTCTCACCAAGTTGCCAAgTATTCTTTGGACTTTGTATATCTGAGTATAGCAATTTTGTTTTCGTCTTGGACAGagGTGGCATGCTGGATGCACACCGGGGAACGTCAAACAGCGAAGATGAGAATGGCTTATCTAAGGTCAATGCTGAATCAAGACATAAGTCTCTTTGATACTGAAGCATCAACTGGGGAGGTCATTTCTGCCATTTCCAGCGAAATCATCGTTGTACAAGATGCACTATCTGAGAAGGTAGGGAATTTCTTGCACTACATAAGCCGATTCATCGCGGGGTTTACTATTGGATTCGTGAGAGTATGGCAAATCAGTTTGGTGACTCTTTCAATTGTTCCTTTGATTGCCCTCGCTGGAGGTCTTTATGCTTACGTCACCATTGGGCTTATTGCCAAGGTCCGAAAGGCCTACGTTAGGGCTGGTGAAATCGCCGAAGAGGTGATAGGGAATGTAAGAACTGTACAAGCATTTGCAGGAGAAGAGAGAGCAGTGAGATCATACAAAGCGGCTCTCATAAATACATACAAAAATGGTCGGAAAGCAGGTTTGGCAAAGGGTCTTGGATTGGGTTCCATGCATTGTGTCCTGTTTCTGTCATGGGCTCTGCTTGTTTGGTTCACTAGTGTTGTTGTTCACAAGAACATTGCCAATGGAGGCGACTCTTTCACTACCATGCTCAATGTTGTCATCTCTGGCCTGTCACTTGGGCAAGCAGCACCGGATATCTCTGCATTTATCCGAGCTAAGGCAGCAGCCTATCCTATTTTTGAGATGATAGAGAGGGAAACAGTGAGCAAAATCAGCTCAAAAACTGGATCCAAATTGAGCAAATTGGATGGTCACATCCAATTTAAAGACGTGTGTTTCAGTTATCCATCTCGTCCTGATATAGTTATCTTCAACAACCTCTATCTTGACATTCCTCCTGGAAAAATTATAGCCCTAGTGGGAGGAAGTGGATCTGGAAAGAGCACTGTTATATCATTGATTGAACGTTTCTATGAGCCCCGTTCTGGACATATACTATTAGATGGAATTGATATTCGGGAACTTGATCTCAAATGGCTAAGAAGGCAAATTGGGCTTGTTAATCAAGAACCTGCCCTTTTTACCACAAGCATCagagaaaatattttgtatGGAAAAGATGATGCTACTCTCGAGGAACTTAAACGTGCTGTGAAGCTTTCAGATGCTCAATCTTTCATTAACAATCTTCCTGAAAGATTAGAAACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGTGGACAAAAGCAAAGGATTGCAATATCCCGAGCTATTGTGAAAAATCCTTCAATCCTTTTATTGGATGAAGCTACAAGTGCTTTGGATGCAGAGTCTGAGAAGAGTGTACAGGAAGCTCTTGATCGTGTGATGGTTGGTAGAACAACTGTGGTAGTGGCACACAGGCTTTCTACAATTAGGAATGCAGATATGATTGCTGTTGTTCAGGGAGGGAAAATTGTGGAAACTGGTAACCATGAAGATCTCATTTCAAAACCAAATAGTGTATATGCATCTCTAATTCAACTCCAAGAGACTGCTTCTTTGCAAAGCCACCCCTCAATAGGTTCTACCCCTAGCTTGTCACAATCACCAAGCATAAGGTACTCAAGAGAATTATCCCGTACAACAAGAAGCCTTGGCGGTAGTTTTCGGTCAGATAAAGAATCTTCAAGCCGTTTTTGTGGTGAAGTGGAAAATGTTGGCAAGTCAAGTTCTGTTTCAGTAAGAAGGCTGTATTCGATGGTTGGACCTGACTGGTTGTATGGAGTTTTTGGCACCATTTGTGCATTCATTGCAGGAGCCCAGATGCCCCTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCATATTATATGGACTGGGATACAACACGtcatgagataaaaaaaattgctttcCTCTTTTGTGGGGCTGCAGTTATAACTGTTACAGTGCATGCCATTGAGCATCTTTCTTTTGGAATAATGGGCGAGCGACTCACTCTTCGTGTGCGAGAAATTATGTTTTCTGCTATTTTGAAGAATGAAATTGGTTGGTTTGATGAAACAAACAACACGAGTTCTATGCTATCATCACGTTTAGAGACGGATGCAACTTTGTTACGTACTATAGTTGTTGATCGGTCTACAATTTTGTTACAGAATGTTGGCCTTGTGGTTGCTTCATTTATCATTGCCTTCATCTTGAACTGGAGGATAACACTCGTTGTCTTGGCCACATACCCTTTGATCATTAGTGGTCACATCAGTGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCACAGCATATCTAAAAGCCAACATGCTGGCAGGGGAAGCTGTGAGTAACATACGTACTGTTGCTGCATTTTGTTCTGAAGAGAAGGTCCTACAACTTTATGCTAATGAGCTTGTTGAGCCTTCCAACCTTTCCTTTAAACGGGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTCATTTTCTCATCTTATGGTCTTGCCTTGTGGTATGGTTCTGTTTTGATGGAAAAGGAGCTGGCTTCCTTCAAATCAGTGATGAAGTCGTTTATGGTTCTGATTGTAACAGCATTGGCCATGGGGGAGACTTTGGCTTTGGCCCCAGACCTTTTGAAAGGGAACCAAATGGTTGCATCAGTTTTTGAGGTGATGGATAGAAAAACAGGAATAATGGGGGATTCTGGAGAAGAGCTAAAGATGGTGGAGGGAACAATTGAGCTCAAAAGCATCCATTTTAGCTACCCTTCAAGGCCAGATGTAGTTATCTTTAAAGATTTTAATCTTAGAGTGCCTTCAGGGAAGAGTATAGCTTTAGTGGGACAAAGTGGTTCTGGTAAAAGCTCTGTCATCTCCCTCATACTCAGATTCTATGATCCAACATCTGGGAGAGTCATGATTGATGGGAAAGACATAAGGAGGCTGAATCTGAAATCTCTAAGAAAACACATTGGTCTTGTGCAACAAGAACCAGCTCTTTTTGCAACATCAATATTTGAAAACATTGTATATGGAAAGGAAGGAGCCTCTGATTCTGAAGTGATAGAAGCAGCTAAGCTAGCCAATGCTCATAGCTTCATCAGTAGTCTTCCAGATGGATATACCACAAAGGTAGGAGAGAGAGGAGTTCAACTATCTGGAGGGCAGAAACAAAGGGTAGCCATAGCTAGAGCAGTTCTGAAGAACCCAGAAATATTGCTACTTGATGAAGCCACAAGCGCTTTGGATGTGGAATCAGAGAGGGTGGTGCAGCAAGCACTGGACAGATTGATGCAGAACAGGACAACAGTTATGGTGGCACACAGGCTATCCACAATAAGAAATGCAGATCAAATCTCAGTTTTGCAGAATGGGAAGATAATAGAACAAGGGACTCATTCTAGTCTTATAGACAACAGAAACGGAgcatattttaaattagtcaaccTTCAACACCATCATCGGCAATAA 3756 0.4161 MSDRSSFSGDSPAVDMRERKEEEGKKQRKVPLLKLFSFADSYDYVLMAIGSIGACVHGASVPVFFIFFGKLINVIGLAYLFPKEASHQVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQTAKMRMAYLRSMLNQDISLFDTEASTGEVISAISSEIIVVQDALSEKVGNFLHYISRFIAGFTIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALINTYKNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKNIANGGDSFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERETVSKISSKTGSKLSKLDGHIQFKDVCFSYPSRPDIVIFNNLYLDIPPGKIIALVGGSGSGKSTVISLIERFYEPRSGHILLDGIDIRELDLKWLRRQIGLVNQEPALFTTSIRENILYGKDDATLEELKRAVKLSDAQSFINNLPERLETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADMIAVVQGGKIVETGNHEDLISKPNSVYASLIQLQETASLQSHPSIGSTPSLSQSPSIRYSRELSRTTRSLGGSFRSDKESSSRFCGEVENVGKSSSVSVRRLYSMVGPDWLYGVFGTICAFIAGAQMPLFALGISHALVSYYMDWDTTRHEIKKIAFLFCGAAVITVTVHAIEHLSFGIMGERLTLRVREIMFSAILKNEIGWFDETNNTSSMLSSRLETDATLLRTIVVDRSTILLQNVGLVVASFIIAFILNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSTAYLKANMLAGEAVSNIRTVAAFCSEEKVLQLYANELVEPSNLSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKTGIMGDSGEELKMVEGTIELKSIHFSYPSRPDVVIFKDFNLRVPSGKSIALVGQSGSGKSSVISLILRFYDPTSGRVMIDGKDIRRLNLKSLRKHIGLVQQEPALFATSIFENIVYGKEGASDSEVIEAAKLANAHSFISSLPDGYTTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQNGKIIEQGTHSSLIDNRNGAYFKLVNLQHHHRQ 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4177 1251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 371 607 IPR003439 GO:0005524
Sto6g4177 1251 CDD ABC_MTABC3_MDL1_MDL2 1008 1246 - -
Sto6g4177 1251 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524
Sto6g4177 1251 MobiDBLite consensus disorder prediction 1 25 - -
Sto6g4177 1251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1244 IPR003439 GO:0005524
Sto6g4177 1251 CDD ABC_6TM_Pgp_ABCB1_D2_like 678 993 - -
Sto6g4177 1251 Gene3D ABC transporter type 1, transmembrane domain 95 976 IPR036640 GO:0005524|GO:0016021
Sto6g4177 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1000 1246 IPR027417 -
Sto6g4177 1251 Pfam ABC transporter transmembrane region 49 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g4177 1251 Pfam ABC transporter transmembrane region 690 961 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g4177 1251 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 344 - -
Sto6g4177 1251 Pfam ABC transporter 390 538 IPR003439 GO:0005524
Sto6g4177 1251 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524
Sto6g4177 1251 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 23 1248 - -
Sto6g4177 1251 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 23 1248 IPR039421 -
Sto6g4177 1251 SUPERFAMILY ABC transporter transmembrane region 35 341 IPR036640 GO:0005524|GO:0016021
Sto6g4177 1251 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524
Sto6g4177 1251 Gene3D - 369 637 IPR027417 -
Sto6g4177 1251 SUPERFAMILY ABC transporter transmembrane region 675 989 IPR036640 GO:0005524|GO:0016021
Sto6g4177 1251 Gene3D - 998 1251 IPR027417 -
Sto6g4177 1251 SMART AAA_5 1035 1221 IPR003593 -
Sto6g4177 1251 SMART AAA_5 398 590 IPR003593 -
Sto6g4177 1251 CDD ABC_MTABC3_MDL1_MDL2 371 609 - -
Sto6g4177 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 609 IPR027417 -
Sto6g4177 1251 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 689 975 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g4177 1251 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 336 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g4177 1251 MobiDBLite consensus disorder prediction 615 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4177 Sto-Chr6 45041058 45047683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4177 42 615 Calmodulin-binding Proteins AT2G36910 39.691 5.53e-114 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4177 K05658 - gmx:100810688 2128.98