Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4175 ATGGTTTCTAGGTCATATTCAAACTTGTTAGATCTTACTTCCTGTGGCTCTCCAACTTTTGGTCGTGAGAAGAAGAGGCTTCCGCGAGTGGCAACTGTTGCAGGAGTACTTTCTGAACTAGATGATGAAAACAACAGTACTGGCTCAGATGCTCCCTCATCCATTTCTCAAGATAGGATGATAATTGTAGGTAACCAGCTTCCATTACGGGCACACAGAAAGAATGATGGTAAGTGGGACTTCACCTTGGATGAGGACTCACTTCTTTTACAGCTGAAAGATGGTCTTGGAGATGATGTAGAAGTGATCTATATTGGGTGTCTTAAAGAAGAAGTTGATGTAAGTGAGCAAGATGATGTTGCTCAGTACTTGCTTGACACATTCAAATGTGTACCCACTTTTCTGCCTCCTGAGCTCTTCAGCAAATTCTATCACGGGTTCTGCAAACAGCATCTATGGCCTTTATTTCACTACATGCTTCCATTGTCACCTGATCTTGGTGGTCGATTCGATCGATCTCTTTGGCAAGCTTATGTTTCAGTGAACAAGATATTTGCAGATAAAGTAATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTACCAACGTTTTTAAGGAAGAGATTTAACAGGGTAAGGCTAGGATTCTTCCTCCACAGTCCATTCCCTTCCTCTGAGATTTACCGAACTCTTCCTGTGAGGGATGAGCTTCTTAGAGCTCTTCTGAACTCTGACCTGATTGGGTTTCATACTTTTGATTATGCAAGGCACTTCCTCTCTTGTTGCAGTAGAATGCTTGGGCTCTCTTATCAATCCAAGCGGGGTTACATAGGTCTTGAGTACTATGGTAGAACTGTTAGTATTAAGATTCTTCCTGTTGGGATTCATATAGGTCAACTTCAATCTGTTATGAATCTTCCTGAGACAGAAAGCAAGGTCACAGAGTTACGAGACCAGTTCAGAGGTCAAACTGTGATGCTTGGGGTTGATGACATGGATATCTTCAAAGGCATTAGCTTAAAACTTTTGGCCATGGAACAGTTGCTTTTACAACATCCAGATAAGAGGGGCAAAGTTGTTATGGTCCAAATTGCAAACCCTGCAAGAGGCCGGGGTAAGGATGTACAAGAGGTACAGAGTGAAACTTATGCCACAGTAAAAAGGATAAATGATGCATTTGGAAGGCCTGGATACACACCTGTGATCTTGATTGATAAACCACTTCAGTTTTATGAGCGAATAGCTTACTATGTGACTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAATCTTATACCCTATGAATATGTCATATGTCGACAAGGAAATGAGAAGCTTGACCAGATTTTAGGGTTAAATCCATTTTCTCAAAAGAAGAGCATGCTGGTGGTATCTGAGTTCATTGGGTGCTCCCCATCATTAAGTGGGGCGATTCGAGTGAATCCATGGAACATTGATGCTGTTGCTGAAGCTATGGATTCTGCCCTTGTAGTCCCAGAGTCTGAAAAACAGATGCGGCATGAGAAGCATTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCACATAGCTTCTTGCAGGATTTGGAAAGGGCGTGTAGGGACCATCTCAGGAGGAGGTGCTGGGGAAttggttttggtttaggattcCGGGTAATTGCTTTAGATCCAAATTTCAGAAAGCTATCAGTTGAGCATATTGTTTCAGCTTATAAAAGGACCAAGCACCGGGCAATTCTTTTGGATTATGATGGTACCATGGTGCAGCCTGGATCAATTAGTACAACACCTAATGCTGAGGCTGTTGGAATCTTGAAAAGCTTGTGTAGGGACACTGAGAATGTTGTTTTCATTGTTAGTGGGAAGGAGAGAAAGACTCTGACTGATTGGTTTTCTTCATGTGAAAGGCTGGGGATTGCAGCTGAGCATGGTTATTTTTTGAGGACGAATCAAGATGCAGAATGGGAAACTTGTCTTTCTGTGCCAGATTTTGATTGGAAACAGATTGCGGAGCCAGTAATGCAATTGTACGCAGAAACAACTGATGGTTCTAACATAGAGGCCAAAGAGAGTGCTCTTGTTTGGAATTATCAGTATGCAGACCGAGACTTTGGTTCATGCCAGGCCAAGGAGCTTCTAGATCATCTGGAAAGTGTTCTGGCCAATGAACCTGTTTCTGTTAAAAGTGGCCCACACATTGTAGAAGTTAAACCTCAGGGTGTGAACAAGGGTACTGTAGCAGAGCGTCTTCTCCTATCGATGCACGAAAAGGGAGTTGTCCCAGATTTTGTTCTATGCATTGGGGATGATAGATCGGATGAGGACATGTTTGAGGTAATAACAAGCGCAAGGAGCTTGGTGTCCCCGGTTGCGGAAGTGTTTGCTTGCACAGTAGGGCAGAAACCAAGCAAAGCCAAGTATTTCTTGGAGGACACAAGTGAGATCTTGAGAATGTTGCATGGGCTTGCCAATGCTTCAGAGCAGTCTGCTAGGAGTTCTTCTCCCCAATCTTCTCATTGA 2559 0.4279 MVSRSYSNLLDLTSCGSPTFGREKKRLPRVATVAGVLSELDDENNSTGSDAPSSISQDRMIIVGNQLPLRAHRKNDGKWDFTLDEDSLLLQLKDGLGDDVEVIYIGCLKEEVDVSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETESKVTELRDQFRGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGKVVMVQIANPARGRGKDVQEVQSETYATVKRINDAFGRPGYTPVILIDKPLQFYERIAYYVTAECCLVTAVRDGMNLIPYEYVICRQGNEKLDQILGLNPFSQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALVVPESEKQMRHEKHYRYVSTHDVAYWAHSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMVQPGSISTTPNAEAVGILKSLCRDTENVVFIVSGKERKTLTDWFSSCERLGIAAEHGYFLRTNQDAEWETCLSVPDFDWKQIAEPVMQLYAETTDGSNIEAKESALVWNYQYADRDFGSCQAKELLDHLESVLANEPVSVKSGPHIVEVKPQGVNKGTVAERLLLSMHEKGVVPDFVLCIGDDRSDEDMFEVITSARSLVSPVAEVFACTVGQKPSKAKYFLEDTSEILRMLHGLANASEQSARSSSPQSSH 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4175 852 CDD HAD_TPP 591 827 - -
Sto6g4175 852 Gene3D - 715 851 IPR023214 -
Sto6g4175 852 Gene3D - 589 707 IPR023214 -
Sto6g4175 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 842 IPR001830 GO:0003824|GO:0005992
Sto6g4175 852 Gene3D Glycogen Phosphorylase B; 311 527 - -
Sto6g4175 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Sto6g4175 852 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Sto6g4175 852 Pfam Glycosyltransferase family 20 59 543 IPR001830 GO:0003824|GO:0005992
Sto6g4175 852 Pfam Trehalose-phosphatase 593 826 IPR003337 GO:0003824|GO:0005992
Sto6g4175 852 Gene3D Glycogen Phosphorylase B; 52 310 - -
Sto6g4175 852 TIGRFAM T6PP: trehalose-phosphatase 588 835 IPR003337 GO:0003824|GO:0005992
Sto6g4175 852 SUPERFAMILY HAD-like 590 836 IPR036412 -
Sto6g4175 852 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 842 - -
Sto6g4175 852 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 793 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4175 Sto-Chr6 45030829 45034243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4175 1 836 Trehalose Biosynthesis Gene Families AT4G17770 79.524 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4175 K16055 - gmx:100782799 1541.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4175 6 45030829 45034243 Sto6g4175 6 45030829 45034243 ECH