Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4159 ATGGAGCTATTTCCGGCGCAGCCAGACTTGTCGTTGCAAATAAGCCCTCCAAATCCAAACACAAAGGCTACAAGTAATAATTGGAGTTGGAGAAAACAAAAAGATGAGGTTGATTTGGGTTTGTGGAAGAGAGGTCTGGATTCCTCCTCTACAATTAAAACTAGTACTCTTATTCCTGCACCTCATGCTCATCATAACAACAACAAGTTTCACCACCCACTGCTCTTCCAACATCAACATCAAGAGCAGGTGGGGGGGTTTCTGAGAGGAATCCCTCTGTACCAACACAATCCTTCTCGCTTCCTCTCTCGCTTTCCTCCTAAGCGCAGCATCAGAGCCCCCAGGATGCGTTGGACTTCCTCCCTCCATGCTCGTTTTGTTCATGCCGTTCAGCTTTTGGGTGGCCATGAAAGGGCAACGCCTAAGTCTGTTCTTGAGCTCATGGATGTCAAGGATCTCACTTTAGCCCATGTTAAATCTCATTTGcagATGTACCGAACGGTGAAAACCACAGATAGAGCAGCGGCTTCCTCAGgGCAATTATCTGATGTATATGATAATGCATCATCTGGAGATACTTCTGAAGATTTTATGTTTGACATGAACAATTCAAGAAACTCTGATATTTCTACCAAGCAAGAAAAACCACGTGCTAATCAAGATAAACAACATCATGTACTTTGGAGCAACTCTTCcagGGAAGCTTGGTTGCATGGAAAGCCAAAGGTGGATTATTCTGTTAGAAATGTGACTTCTTTTGAGAAGGAAATGGATCCAAAATGCCAAAGTTATGAGAGATTATCAGATGGAAGTGCATCCTCAGACATCTCAGGAACAAGCCCCAAGAAGCCTACTTTGGATTTGGAATTTAGCTTAGGCCAGCCAATttga 891 0.431 MELFPAQPDLSLQISPPNPNTKATSNNWSWRKQKDEVDLGLWKRGLDSSSTIKTSTLIPAPHAHHNNNKFHHPLLFQHQHQEQVGGFLRGIPLYQHNPSRFLSRFPPKRSIRAPRMRWTSSLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQLSDVYDNASSGDTSEDFMFDMNNSRNSDISTKQEKPRANQDKQHHVLWSNSSREAWLHGKPKVDYSVRNVTSFEKEMDPKCQSYERLSDGSASSDISGTSPKKPTLDLEFSLGQPI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4159 296 MobiDBLite consensus disorder prediction 256 296 - -
Sto6g4159 296 Gene3D - 113 170 - -
Sto6g4159 296 SUPERFAMILY Homeodomain-like 111 167 IPR009057 -
Sto6g4159 296 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 51 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sto6g4159 296 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 99 295 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sto6g4159 296 MobiDBLite consensus disorder prediction 201 224 - -
Sto6g4159 296 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 99 295 - -
Sto6g4159 296 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 51 - -
Sto6g4159 296 MobiDBLite consensus disorder prediction 1 27 - -
Sto6g4159 296 MobiDBLite consensus disorder prediction 11 27 - -
Sto6g4159 296 MobiDBLite consensus disorder prediction 266 281 - -
Sto6g4159 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 114 167 IPR006447 GO:0003677
Sto6g4159 296 Pfam Myb-like DNA-binding domain 115 166 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4159 Sto-Chr6 44937846 44941864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4159 1 295 G2-like Transcription Factor Family AT4G17695 37.644 1.08e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto6g4159 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4159 - - aprc:113868756 370.548