Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4150 ATGGGTAGCAGTGACATGGATAAAACCCCAAAAGAGAAGGAGCCAAAGACACCTCCTGCTTCGTCACAGGAGCAGTCTTCAACCCCTGGCACTGGAACAATTAATCCTGATTGGTCCAGCTTTCAGGCTTATTCTCCTTTACCTCCACATGGGTTCTTGGCATCAAGTCCCCAAGCCCATCCATATGTGTGGGGCGTCCAGCTAGTTGCTTTTGAGCATGACAATGGCTTCCAGGTTAGTTGTGAGATAGCAATTGAACATTGTAAAGATGGGATTACGACAATAGTGGTCATGGCAGTGGGCATGATAGGTGGTGATTGTTGTCTAGGTAACATGAGTGTCATCACCTCCTTTATTAACTGGAATTCAAAGACAAAAATCCGACCTAGTTGgaaagtaCATCAGTTACAGTGCACAACTTGTGTGTCTACATCTCATATTATGCCTTCTTATGGTACCCCACCACATCCTTATGTTGCAATGTATCCCCATGGTGGTATATATGCGCATCCATCTATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCTGTGCCATCTCCCAATGGTATTGCTGAAGCTTCAGGAAATACTCTTGGTGGGATGGAAAGTGATGGTAAGCCTCATGAGGTGAAGGAAAAATTGCCGATTAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACCGGGAAGAATATTGAACTTGGTAAAACATCAGGGACATCTGCTAATGGAATTCATTCAAAAAGTGGGGAGAGTGCAAGCGAAGGTAGTAGTGAAGGAAGTGATGCTAATTCTCAGAATGTAAGTGCTGAGCCACTGGACTCACAGTTGAAATCGGAGGGAAGGCAAGATTCTGTGGAAGCTGAACCATCTCAAAATGGCAGCATGGTGCATGCTCCTCAAAATGGGGGACCTAATACTCCACATATTAATCAATCTATGGCTATCATACCTATCTCTGCTGCTGGTGCTCCTGGTGGAGTTCCTGGTCCCACTACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCACTTCATCCACTATTCCTGCACTACGCGGAAAGGTTCCTTCTACTGCCGTTGCTGGTGGGATGGTTACTGTAGGATCACGGGAGAGTGTTCAGTCACAACTTTGGCTACAGGATGAAAGAGagctaaagagacaaaggcggAAGCAGTCTAATAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGTGCTGAGGCTTTGAAGCAAGATAATGCTTCTCTCCAGTCTGAAGTGATTCGGATCAGGAGTGAGTATGAGAAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAGAGACTTGGGGAATTACCTGGGAATGAAGATCCCAAGTCTGGGCGGAAAGACCAACATGTGGATAGTGACACTCAACAGTGTGAGCAGGCAGAAGCTGTGCAGGGTGGTCATTAG 1476 0.4512 MGSSDMDKTPKEKEPKTPPASSQEQSSTPGTGTINPDWSSFQAYSPLPPHGFLASSPQAHPYVWGVQLVAFEHDNGFQVSCEIAIEHCKDGITTIVVMAVGMIGGDCCLGNMSVITSFINWNSKTKIRPSWKVHQLQCTTCVSTSHIMPSYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAVPSPNGIAEASGNTLGGMESDGKPHEVKEKLPIKRSKGSLGSLNMITGKNIELGKTSGTSANGIHSKSGESASEGSSEGSDANSQNVSAEPLDSQLKSEGRQDSVEAEPSQNGSMVHAPQNGGPNTPHINQSMAIIPISAAGAPGGVPGPTTNLNIGMDYWGAPTSSTIPALRGKVPSTAVAGGMVTVGSRESVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKQDNASLQSEVIRIRSEYEKLLSENAALKERLGELPGNEDPKSGRKDQHVDSDTQQCEQAEAVQGGH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4150 491 Pfam bZIP transcription factor 387 449 IPR004827 GO:0003700|GO:0006355
Sto6g4150 491 MobiDBLite consensus disorder prediction 224 279 - -
Sto6g4150 491 MobiDBLite consensus disorder prediction 197 314 - -
Sto6g4150 491 SUPERFAMILY Leucine zipper domain 390 446 IPR046347 GO:0003700|GO:0006355
Sto6g4150 491 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 389 452 IPR004827 GO:0003700|GO:0006355
Sto6g4150 491 MobiDBLite consensus disorder prediction 19 39 - -
Sto6g4150 491 MobiDBLite consensus disorder prediction 454 478 - -
Sto6g4150 491 MobiDBLite consensus disorder prediction 289 314 - -
Sto6g4150 491 MobiDBLite consensus disorder prediction 1 18 - -
Sto6g4150 491 Coils Coil 407 455 - -
Sto6g4150 491 MobiDBLite consensus disorder prediction 454 491 - -
Sto6g4150 491 SMART brlzneu 387 451 IPR004827 GO:0003700|GO:0006355
Sto6g4150 491 CDD bZIP_plant_GBF1 392 442 IPR045314 GO:0003700|GO:0006355
Sto6g4150 491 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 394 409 IPR004827 GO:0003700|GO:0006355
Sto6g4150 491 Gene3D - 390 444 - -
Sto6g4150 491 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 69 - -
Sto6g4150 491 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 144 491 - -
Sto6g4150 491 Pfam Disordered region downstream of MFMR 213 354 - -
Sto6g4150 491 MobiDBLite consensus disorder prediction 205 219 - -
Sto6g4150 491 Pfam G-box binding protein MFMR 144 174 IPR012900 -
Sto6g4150 491 Pfam G-box binding protein MFMR 1 68 IPR012900 -
Sto6g4150 491 PANTHER G-BOX-BINDING FACTOR 3-RELATED 144 491 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sto6g4150 491 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 69 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sto6g4150 491 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4150 Sto-Chr6 44854224 44859173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4150 1 67 bZIP Transcription Factor Family AT2G35530 62.162 1.77e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto6g4150 MFMR_assoc 8.5e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4150 K09060 - gmx:778122 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4150 6 44854224 44859173 Sto6g4150 6 44854224 44859173 ECH