Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4138 ATGGTTAAGCTGATTCCTTATCCATCTATCATTGATTGTATGGACGAGGAATTGCTAACGACTTTTCAACCTTACTATCGTGGTGGCCCACCACGTCCCCGTCATTGCCTGcaGTATGATCCTCGGGTGAGAGAACTCTTGGACTTCAGCATCTACCTAGACATCAGCAATGAAGTGAAATCGCTTGGAAAATTCagAGATATGGCAGAACGTGGGCATAGCCTTGAAAGCATCAAAGCTAGCATTGAAGCAAGAAAACCTGATTTTGAGGCTTTTATTGatCCTCAAAAGCAATACGCAGATGCAGTGATAGAAGTGTTGCCAACACAACTGATTCCAGACGACAATGAAGGGAAGAAGCTCACTTGCTCTTACCCTGGCATCAAATTCTTCTATGGACCTGAAACTTACTATGGTCAcgagCCTCTCAACCAAGTCTATGGAGAGTTAACAGCAATGTTGAAGCATGCCGAATTTCCTGGAAGCAACAATGGGACTGGTCTCTTCCAAACCATAATTGGTTTGAAGATAAGAGACCTATTTGAGCAGATATTAGCAAGTAGGGCTCAGACCCAGCAAAAGCAGCTAAGGTTGACAATCCTGCCTCTAACTCATGACACAGCAGAAAGCAAGGATGAGTTTTCTGTTAAGAAGTTCACTGAAGATTGA 669 0.4275 MVKLIPYPSIIDCMDEELLTTFQPYYRGGPPRPRHCLQYDPRVRELLDFSIYLDISNEVKSLGKFRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPDDNEGKKLTCSYPGIKFFYGPETYYGHEPLNQVYGELTAMLKHAEFPGSNNGTGLFQTIIGLKIRDLFEQILASRAQTQQKQLRLTILPLTHDTAESKDEFSVKKFTED 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4138 222 Gene3D - 35 120 IPR027417 -
Sto6g4138 222 PANTHER PHOSPHORIBULOKINASE 39 120 - -
Sto6g4138 222 PANTHER PHOSPHORIBULOKINASE 145 192 - -
Sto6g4138 222 PANTHER PHOSPHORIBULOKINASE 118 141 - -
Sto6g4138 222 PRINTS Phosphoribulokinase family signature 63 80 IPR006082 GO:0005524|GO:0005975|GO:0008974
Sto6g4138 222 PRINTS Phosphoribulokinase family signature 81 104 IPR006082 GO:0005524|GO:0005975|GO:0008974
Sto6g4138 222 PANTHER URIDINE KINASE 118 141 - -
Sto6g4138 222 PANTHER URIDINE KINASE 39 120 - -
Sto6g4138 222 PANTHER URIDINE KINASE 145 192 - -
Sto6g4138 222 Pfam Phosphoribulokinase / Uridine kinase family 39 112 IPR006083 GO:0005524|GO:0016301
Sto6g4138 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 140 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4138 Sto-Chr6 44774946 44776976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4138 40 104 PRT Gene Family AT3G27440 34.328 6.98e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4138 K00855 - nnu:104611432 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4138 6 44774946 44776976 Sto6g4138 6 44774946 44776976 ECH