Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4135 ATGGGTCGTGGCGTTAGAGAAATTCTCATCACCATCGTCGTCGTCTCTGGCACTGCAATTGCTGACACAAACACACTGCATCAGTCAGATTCACTCAACTCCACCCAACGCCTTGTTTCCACCAACAACGATTTCATCTTAGGATTCTTCAAGCCTTCCGAATTTACGGGTGTTACTTACTTAGCCATCTGGCACAATTGGGTTACAGTAGAGCATGGGGCCCAATGCCCAATATGGATATCAGTGGAGGAAAATGATTTGTTGCTAGTAGAGTCTCTTGTCTTGTATAACTCCAGGTTGGCTTCTGTTTATGCCATCACTTGGATTCCACTGAGCCAGAAATCACAAGCCGCCATTCTTGGTATTCGCCAGAAACAGGAATTTACTGTAGCAAACATTCTCCTCTCCAACTTCCTTCAGACCCTTTTCTTGATgttgcttcttttcttttttctcaccAACATAATGGGGTTTCCGCTCTTATCGATTCTTCCTCTGGTTGTTCAATTTCTTATTCCCAACTCTTTCCTTTCATCAAATCCATGGCATCTGGTCTCCGTAAAATGGGCGTTTCGCAAGGTGACGTCGTTTTACTCCTACTTCCTAACTCCATTTTCTATCCCATTATTTTCTTGGGGTTTTATATCTTGGCGCCATTGTTACGCCATTGAATCCACTAGTAGTATATCTGAAATCCGTAAGCAAATTTCCGATGCTGGCGTGAGTCTGGCTTTTTCTGTACAAGAAAAAGCTAGGAAACTAGAATCACTGAGCATTCCAATTATCCAAGTGCCTGAAAATTTGAAGGATATGAAGAACGTTGGTTTCTCAGTTTTTTATAACCTTTGTTACGGTAACTTGGATTTGTTTCCGAGGCCGGTAATTAAACAAGAAGACGCGGCGGCTATAATGTACTCTTCCGGGACTACGGGTGCGAGCAAAGGAGTTGTTCTAACACACAAGAATTTTATTTCTATGATTGAGCTTTTTGTGAGGTTTGAAGCTTCTCAATATGAATATTCAAGCTCGAAGAATGTGTTTCTAGCTGTTCTGCCTATGTTCCATATATATGGTTTATCACTCTTTGCTACAGGATTACTGTCTCTAGGTTCTACAGTTATTGTAATGAGAAAATTTGACGTCAATGAGGCTATCAAGGTGATcgataaatacaaaattacacACGTGCCTGCTGTTCCACCGATGTTGACAGCATTGATTAAAATGGTGAAGGGCATAAATGGGAGTTGTTTGCAGAGTTTGATACAGGTGTCCTGTGGTGCAGCAACTTTGAGCAGGAAAACTATAGAGGACTTCGTCCATACTCTCCCTAACGTTGATTTTATACAGGGTTATGGACTGACTGAGTCGACCGCAGTAGGAACACGAGGCTTCAATACTGAAAAGTGTCGAAATTATTCTTCAATAGGTTTGTTAGCTCCCAACATGGAAGCTAAAGTGGTTGACTGGAATACTGGTGCTTTTTTGCCCCCAGGCAGCAGTGGTGAGCTTTGGTTGAGAGGGTCTTCAATTATGAGAGGTTACTTGAATAATAATGAAGCCACAATGTCATCAATCGATAAAGATGGTTGGCTACGCACTGGGGATGTAGTTTGTTTTGATGAAGATGGATATTTGCATATATCTGACCGCTTGAAAGATATGATCAAATACAAAGGCTATCAGGTTGAGGAAACTTCCGCTGGTTCTTTGCTTAGGAGTACCAATGATGAGGAAACAGGGGAGATACCAGTGGCATTTGTGGTCAGGAAGGTTGGAAGTGTGCTTTCTCAGGAAGCTATTCTGGACTATGTTGCTCAGCAGGTGGCTCCATACAAGAAGGTGAGGAAAGTGGTGTTCATTGAAAACTTACCTAGGTTTTTGCAAGTGGGTACTCAAGAGAATCACAGAAGTAGAGAAATTTCGGCGAAATCAACTGAAGCTGGAAGTGGGAACACTTCCACATTGGGCCAAAGCGTGTTTGGTCTATTGCATTTGATTGTCTCCCTGGGGCTTATTCTTGCGATGGATAAGTTTTTGAAGAAAGCCTTTGTGGCTGCTGCGATTAAGTTCCCTAGTGCACTGTTTGGGATGTTCTGTATATTCTCCGTTTTGATTATTCTTGATACCATTGTGCCATCTGCAGCTACAGCCTTGATGAACTTCTTTGAACCGGCGCTTTTGTTCATTCAGAGATGGCTCCCCTTGTTCTATGTTCCTTCTTTGGTTGTCTTGCCCGTTTCTGTTAAAGATATTCCCGCTGCTTCAGGCATCAAAATTGGCCTTATTATAGTTGGAGGTTGGCTGGCTACACTATGTGTTGCTGGTTTCACAGCTATAGCAGTTAGAAAAGCTGTGAAGACAGAAATGGTAGAAGCTGAGCCTATGAAAAAGCCCTCTCCATTTTCTCCCCTTGAAGTGTGGGCTTGTACTGGGGTTCTCCTTGGATCATTTGTGGCTGCATTGTATTATCCTACTGCATTGGGGACGACTGTCAGAACGTGCCTTCCCTTCTTACTTGCATCCACAGTGTTAGGCTACATGGTTGGTTCCGGGTTGCCATCAGATGTGAAGAAGGTATTTCATCCAATTATTTGCTGTGCACTATCTGCAGATCTGGCAGCATTCGCTTTTGGATATGTTTCCAAGTTAGGGTTTGAGCCTATTCTAGGATATTACCTTACAAAGGCATCCTCAAATCCCGGAGCTGGGGACATTTTAATGGGATTTTTGGGATCTGTTATTCTCTCTTTTGCCTTCTCCATGTTTAAACAAAGAAAGCTTGTGAAAAGGCATGCGGCTGAGATTTTCACCTCTGTAATAGTCTCAACAGTATTCTCATTGTACTCAACTGCTCTTGTTGGACGTCTTGTTGGGTTAGATCAATCTCTAACCGTCTCCATTCTGCCCAGATGTATAACTGTGGCATTGGCCCTCAGCATTGTGTCTCTATTTGAAGGTACCAATTCATCTCTCACAGCAGCCGTGGTTGTTGTCACTGGTTTGGTTGGAGCAAATTTTGTGCAAGCAACACTGGATAAATTTCGTTTTGGTGATCCAATCGCTCGAGGAATAGCAACTGCATCTAGTGCTCACGGACTTGGAACAGCAGCCTTGTCTGCGAAGGAACCTGAGGCTCTCCCATTTTGTGCCATTGCTTATGCTCTGAATGGTATATTTGGATCCATTCTTTGCTCCATTCCTGCAGTGAGACAAAGCTTGCTTGCTGTAGTTGGCTGA 3240 0.4262 MGRGVREILITIVVVSGTAIADTNTLHQSDSLNSTQRLVSTNNDFILGFFKPSEFTGVTYLAIWHNWVTVEHGAQCPIWISVEENDLLLVESLVLYNSRLASVYAITWIPLSQKSQAAILGIRQKQEFTVANILLSNFLQTLFLMLLLFFFLTNIMGFPLLSILPLVVQFLIPNSFLSSNPWHLVSVKWAFRKVTSFYSYFLTPFSIPLFSWGFISWRHCYAIESTSSISEIRKQISDAGVSLAFSVQEKARKLESLSIPIIQVPENLKDMKNVGFSVFYNLCYGNLDLFPRPVIKQEDAAAIMYSSGTTGASKGVVLTHKNFISMIELFVRFEASQYEYSSSKNVFLAVLPMFHIYGLSLFATGLLSLGSTVIVMRKFDVNEAIKVIDKYKITHVPAVPPMLTALIKMVKGINGSCLQSLIQVSCGAATLSRKTIEDFVHTLPNVDFIQGYGLTESTAVGTRGFNTEKCRNYSSIGLLAPNMEAKVVDWNTGAFLPPGSSGELWLRGSSIMRGYLNNNEATMSSIDKDGWLRTGDVVCFDEDGYLHISDRLKDMIKYKGYQVEETSAGSLLRSTNDEETGEIPVAFVVRKVGSVLSQEAILDYVAQQVAPYKKVRKVVFIENLPRFLQVGTQENHRSREISAKSTEAGSGNTSTLGQSVFGLLHLIVSLGLILAMDKFLKKAFVAAAIKFPSALFGMFCIFSVLIILDTIVPSAATALMNFFEPALLFIQRWLPLFYVPSLVVLPVSVKDIPAASGIKIGLIIVGGWLATLCVAGFTAIAVRKAVKTEMVEAEPMKKPSPFSPLEVWACTGVLLGSFVAALYYPTALGTTVRTCLPFLLASTVLGYMVGSGLPSDVKKVFHPIICCALSADLAAFAFGYVSKLGFEPILGYYLTKASSNPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYSTALVGRLVGLDQSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLVGANFVQATLDKFRFGDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALNGIFGSILCSIPAVRQSLLAVVG 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4135 1079 Gene3D - 219 553 IPR042099 -
Sto6g4135 1079 Pfam AMP-binding enzyme C-terminal domain 576 626 IPR025110 -
Sto6g4135 1079 Pfam AMP-binding enzyme 223 558 IPR000873 -
Sto6g4135 1079 Gene3D - 554 630 IPR045851 -
Sto6g4135 1079 PANTHER BNAA05G16460D PROTEIN 625 1079 - -
Sto6g4135 1079 SUPERFAMILY Acetyl-CoA synthetase-like 225 626 - -
Sto6g4135 1079 PANTHER PUTATIVE SEROTONIN TRANSPORTER 625 1079 IPR007300 -
Sto6g4135 1079 Pfam LrgB-like family 843 1067 IPR007300 -
Sto6g4135 1079 ProSitePatterns Putative AMP-binding domain signature. 303 314 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4135 Sto-Chr6 44756071 44770831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4135 223 626 Monolignol Biosynthesis Gene Families AT4G19010 57.692 3.79e-167 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4135 - - rcu:8278532 729.169