Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4123 TTGAAATCGCTTCTTGTTTTTGGCTTAAATCACGAAGCACTAGTAGTACCTCCACTTCAACCCACAGCATCAACCCACAACACTGAAATGAGCGGTCCGCCGCCGATGTGGATGGGACCTCACCCGCCGCCCTTCACGGTGGCGCAGTGGCAGGAGCTCGAACATCAAGCTCTCATCTTCAAGTATCTCAAGGCCGGATTGGCTGTTCCACCCGACCTCCTAGCTCCGATTCGCAGGAGCCTCCAATTGATGTCGGTTCATCATCCAGCTCTGGGTTATTGCTCCTATTACGGGAAGAAGATAGACCCAGAACCAGGACGGTGCCGGAGGACAGATGGCAAGAAATGGAGATGCTCCAGGGATGCACATCCTGACTCCAAGTACTGTGAACGGCACATGATTCGCCGTCGCTACCGTTCAAGAAAGCCTGTGGAATCACAAGCTGCTCCTCCTACTCAGTCTTCAGACGTTGGTGGTACTGGTGGGAGCAGAAGTGGTTGTGGAAGCTCATTCCACAGCCTGCCCTTGCACACAAATGGTACTCGTGAGGGCTTTACCCTTGGAAACAACGGATCGCAGCTGCAGATAGAGTCTCTTCCCAGTGAGATTAGCAAGAAAGAGTACAGTATTGTCTTTGCGGTGTTTGACTTTTGGAGTCACATCATGCTCGCTTTGAGTCCTAGACTCCTAGAGGAGTGGTTTGGACTACACTCTGAAGTAGATGAGCATGACTTCTTACAGAAGGGCCTGGGAAATGTGAGATATATTGGTTTTGACAATACATCAGACGGCATGTGGTCTCACCTGTCTCAGATTTCCTCAAATCCTGCCTCTGAATCTAGTAACGGTTCTAGTATGACTGCCAACAGCTTTCAACTGCGAGCAGTGCAAGATGCTGAGACATCAAACATCGATACCGAAAGGTCCAAGCAACATGTCTTCAGTGGCCAGTTAGGTTCAGCTGGGTATTTGAAACAGGAATATCAGTCGACTCCGACTCTCTTCAGCGACTGGCCATGGAAAAAAGATGTAGGCTCCCCGGCCAATGGAGTATAG 1056 0.5019 LKSLLVFGLNHEALVVPPLQPTASTHNTEMSGPPPMWMGPHPPPFTVAQWQELEHQALIFKYLKAGLAVPPDLLAPIRRSLQLMSVHHPALGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQAAPPTQSSDVGGTGGSRSGCGSSFHSLPLHTNGTREGFTLGNNGSQLQIESLPSEISKKEYSIVFAVFDFWSHIMLALSPRLLEEWFGLHSEVDEHDFLQKGLGNVRYIGFDNTSDGMWSHLSQISSNPASESSNGSSMTANSFQLRAVQDAETSNIDTERSKQHVFSGQLGSAGYLKQEYQSTPTLFSDWPWKKDVGSPANGV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4123 351 MobiDBLite consensus disorder prediction 139 164 - -
Sto6g4123 351 Pfam WRC 103 145 IPR014977 -
Sto6g4123 351 Pfam QLQ 44 78 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto6g4123 351 PANTHER - 30 346 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto6g4123 351 ProSiteProfiles WRC domain profile. 102 146 IPR014977 -
Sto6g4123 351 ProSiteProfiles QLQ domain profile. 44 79 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto6g4123 351 PANTHER GROWTH-REGULATING FACTOR 30 346 - -
Sto6g4123 351 SMART QLQ_2 43 79 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto6g4123 351 MobiDBLite consensus disorder prediction 146 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4123 Sto-Chr6 44682941 44685693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4123 43 145 GRF Transcription Factor Family AT3G13960 60.909 2.88e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sto6g4123 WRC 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4123 - - lja:Lj2g3v1537380.1 352.058