Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4122 ATGGCTATGGCTATGCTTGTGGCGGCTTCAGGCTCTCTTATTAAAATGGATCCAGGCGTTGTTCTTAAAATGGCGCAAATCGAAGGCAAAGGAAGGGGTCTGATTGCGTCTCAGAATCTGAAAGCTGGCCAAGTTATTCTCACAGAACCCCCCACTCTTCTCTACTCTGCTTTCCCTCTCTTGTCTCAATCTCAATCTCAATCCTCTTATTGTGATCACTGCTTCAGAATCTTACCACTAAATCACACTGCTTTTTCATGCCCCTCTTGTTCCCACCATCGTTTCTGTAGCCACAACTGCCTCTCCATCGCCCTCAAATCCTCTCACTCTCCCTGGGTATGCCATGCCCTGTCTCGCCTCCGACACTCTGCTTCACCACTACTTGAACAATCCCATCAACTTCAAGTTCAAGCTCGTTTCGTTGTGGCTGCTAATAACCTTGCCTCTCGTTCCCCTTCTGATATTCAGATTCTGCTATCTCTTTTGGGTACCCCAGATGAAGGCATACTTAAAGcttcccaatttcttcattctcTAATCGCTTCTCTCTGCCCACCTCAGCACCAGCTCTCTGTTCATCTCACTGCACAGCTTATGGCCATAGATAGACTCAATAATTTCAGCTTAATGGAACCTTACTCCCCACATGGCCCTGAGAGATGTGTTAAAGCTTATGCCATTTACCCAAAAGTCACCATGTTTAACCACAGTTGTCTACCCGATGTATGCCGGTTCGATTATTTCGATACTGGTGCTCCTGGAGATGAACACAACACCGACATCGTTATCAGGATGATTAAGGATGTTTCTGAGGGGGAAGAAATATGTATAAGTTATTTGCGATTCAATAAGGATTATGCTACCAGGAAGAGGATTTTGATGGACGAATATGGGTTTGATTGCGAGTGTGATAGATGCAAGGTTGAAGCAAATTGGGTTGGAGATAGAGATGGTGATTTTCCTCACGCTTGGTTTCTTTCTAAATATGTGTGTGATAGAAACAACTGTTCCGGCACAATGGTTCCTTTGCTTCCGAAGGATGATGATGCACCATCTAATATTCTAGAATGCTCTTTTCTTAAAATGGAGCAGATCCAAGGCAAAGGAAGGGGTCTAATTGCAGCTCACAATCTCAAAGCTGGCCAAATCCTTCTCACAGAATCCCCCACTCTTCTCTACTCTGctttccctctcttctctcaatcctcttcttcttcttattgtGACCACTGCTTCAGAATCTCACCACTAAATCACACTACTTTTGCATGCCCTTCTTGTCACCACCATCGTTTCTGTAGCCAAGATTGCCTCTCCATTGCTCTCAATTCTTCTCACTCTCCCTGGGTATGCCTCGCCCTGTCCCGTCTCCGAGATTCTGCCTCACCACTACTTCAACAATCCCACGAGCTTCAAGTCCAAGCTCGTTTCGTTGTGGCTGTTTATAACCTTGCCTCTTATTCCCCTTCCGATATTCAGATTTTGCTTTCTCTTTTGGGTACCCCAGATGAAGCCATACTTAAAGcttcccaatttcttcattctcTAGTCGCTTCTCTCTGCCCACCTCAGCATCAGCTCTCTCTAGATCTCACTGCTCAGCTTATGGCTAAAGATAGGCTCAATTCTTTCTGCTTAATGGAGCCTTATTCCCCCGATGGCCCTCAGAGATCTATCAAAGCTTATGCGATTTACCCAAAAGCTACCTTCTTTAACCATGATTGTCTACCCAATGCCTGTAGATTCGATTATGTTGATACTAGTGCTCCTGGAGATGAACACAACACCGACATCGTTATCAGGATGATTAAGGATGTTTCTGAGGGGGAAGAAATATGTATAAGTTACTTCCGAATCAATAGGGATTATGCTACCAGGAAGAGGATCTTGATGGAAGATTATAGGTTTGTTTGTGAGTGTGATAGATGCAAGATTGAAGCGAATTGGGTTGGTGATGGTGATTTTCCTCACGCTTGGTTTCTTTCAAAATATGTGTGTGATAGAAACAACTGTTCAGGCACAATGGCTCCTTTGCCTCCAAAGGATGATGATACACCATCTAATATTCTGGAATGTAATTTCTGTGGCAATTTGAAAGATGAGGTTGCTTAG 2112 0.4257 MAMAMLVAASGSLIKMDPGVVLKMAQIEGKGRGLIASQNLKAGQVILTEPPTLLYSAFPLLSQSQSQSSYCDHCFRILPLNHTAFSCPSCSHHRFCSHNCLSIALKSSHSPWVCHALSRLRHSASPLLEQSHQLQVQARFVVAANNLASRSPSDIQILLSLLGTPDEGILKASQFLHSLIASLCPPQHQLSVHLTAQLMAIDRLNNFSLMEPYSPHGPERCVKAYAIYPKVTMFNHSCLPDVCRFDYFDTGAPGDEHNTDIVIRMIKDVSEGEEICISYLRFNKDYATRKRILMDEYGFDCECDRCKVEANWVGDRDGDFPHAWFLSKYVCDRNNCSGTMVPLLPKDDDAPSNILECSFLKMEQIQGKGRGLIAAHNLKAGQILLTESPTLLYSAFPLFSQSSSSSYCDHCFRISPLNHTTFACPSCHHHRFCSQDCLSIALNSSHSPWVCLALSRLRDSASPLLQQSHELQVQARFVVAVYNLASYSPSDIQILLSLLGTPDEAILKASQFLHSLVASLCPPQHQLSLDLTAQLMAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDYVDTSAPGDEHNTDIVIRMIKDVSEGEEICISYFRINRDYATRKRILMEDYRFVCECDRCKIEANWVGDGDFPHAWFLSKYVCDRNNCSGTMAPLPPKDDDTPSNILECNFCGNLKDEVA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4122 703 CDD SET_SMYD 541 643 - -
Sto6g4122 703 Pfam SET domain 31 279 IPR001214 GO:0005515
Sto6g4122 703 Pfam SET domain 369 616 IPR001214 GO:0005515
Sto6g4122 703 ProSiteProfiles SET domain profile. 355 617 IPR001214 GO:0005515
Sto6g4122 703 Gene3D - 124 206 - -
Sto6g4122 703 Gene3D - 466 543 - -
Sto6g4122 703 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 20 359 IPR044238 -
Sto6g4122 703 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 358 702 IPR044238 -
Sto6g4122 703 SUPERFAMILY SET domain 338 644 IPR046341 -
Sto6g4122 703 SUPERFAMILY SET domain 22 302 IPR046341 -
Sto6g4122 703 ProSiteProfiles SET domain profile. 18 280 IPR001214 GO:0005515
Sto6g4122 703 SMART set_7 358 623 IPR001214 GO:0005515
Sto6g4122 703 SMART set_7 20 286 IPR001214 GO:0005515
Sto6g4122 703 Gene3D SET domain 371 644 IPR046341 -
Sto6g4122 703 Gene3D SET domain 33 307 IPR046341 -
Sto6g4122 703 Gene3D - 70 123 - -
Sto6g4122 703 Gene3D - 407 460 - -
Sto6g4122 703 CDD SET_SMYD 199 306 - -
Sto6g4122 703 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 20 359 - -
Sto6g4122 703 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 358 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4122 Sto-Chr6 44675227 44678850 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto6g4122 SET 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4122 - - gmx:100808530 470.314