LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto6g4117	ATGGAGAAAACCAAGTCTGATCAGGTTGTTTTGTTCATTGACCATCTCAACTCTAGTCCTCCGTCCACGGAACCTCATCATGAAAACGACCACACTACTCCTGCCGTTTGTATGAAAACCCTGAACCGCCTCAGCTTCTCCAAGCCCAAATCACGTATCCTAGAAGTAGAACATCCTAACTATTACCACAAACACACAATCTCCGAAGACATCGTCCAATCCTCCTACACCTTGTCTTCGGACGAGGAATGGAGCGAGTACGACGACGAGGACGACGAAGAAGAAGGAGACGAGATGGAGGGGGAGAGGTCGCACCAGAAAAAGAAACGTCGTCGTCGTAAAATCCAATGGAGGCGCGTGGTGGAGTGGGGGTTATTCCTGATCATACTGGCGGGGTTGGTGTGTTCTGTTACGATATCTTGCATAAAAAGGAAGCACGTGTGGGAATTGGAGATATGGAAGTGGGTTCTAATAATGATGGTGACGTTCAGCGGGCGTCTAGTGTCAGGATGGGTTGTGGGAGTTGCGGTGTTCATCATAGAGCGGAACTTCATGCTGAGAGAGAAAGTGCTCTACTTCATATACGGACTCCGGAAGAGCATAAGGAACTGCTTCTGGCTGGGGCTGGTGTTGCTCTCCTATTGGACGGTGGTGTTCGACGACATACAGAGGAAAAACCACAAGTTCCTGAACAAGTTGTTTCAAGCATTGGTGGCGGTTATGATAGGGGCAATCATATGGCTGGTGAAAATCGTGCTGGTGAAAATGCTAGCGTCGTCGTTCCACGTGACCACCTACTTCGACCGCATGAAGGAGAGCGTGTTCCATCATTACATACTGGACACGCTGTCAGGGCCTGCCATGGAAGAGAGTGAGCAGAATCAGAATCAGAATCATCTAAGGAATTCGAGGTCGATGCCTGCCAAGTGGAAGCAGCAAGGGAGGAACTTGTACAAGTCGAGGTCGTCGGGGAAGATAGATATGGAGAAGTTGAAAGAGCTGAGTATGGAGAGTAGGGCGTCGGCGTGGAGCGTCAAGAGGCTGGTCAACTACGTCAGATCCTCGGGCTTGTCCACCATTTCAAGGACGGTGGATCAGTTTGGGAACGCTGAATCGGAGATCAATAGCGAGTGGGAGGCTAGGAATTGTGCCTACAGGATATTCAAGAACGTTGCCAAACCTGCTGCCAAGTAA	1194	0.4983	MEKTKSDQVVLFIDHLNSSPPSTEPHHENDHTTPAVCMKTLNRLSFSKPKSRILEVEHPNYYHKHTISEDIVQSSYTLSSDEEWSEYDDEDDEEEGDEMEGERSHQKKKRRRRKIQWRRVVEWGLFLIILAGLVCSVTISCIKRKHVWELEIWKWVLIMMVTFSGRLVSGWVVGVAVFIIERNFMLREKVLYFIYGLRKSIRNCFWLGLVLLSYWTVVFDDIQRKNHKFLNKLFQALVAVMIGAIIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYILDTLSGPAMEESEQNQNQNHLRNSRSMPAKWKQQGRNLYKSRSSGKIDMEKLKELSMESRASAWSVKRLVNYVRSSGLSTISRTVDQFGNAESEINSEWEARNCAYRIFKNVAKPAAK	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto6g4117	397	MobiDBLite	consensus disorder prediction	80	106	-	-
	Sto6g4117	397	PANTHER	MECHANOSENSITIVE ION CHANNEL PROTEIN 5	2	397	IPR016688	-
	Sto6g4117	397	PANTHER	MECHANOSENSITIVE ION CHANNEL PROTEIN	2	397	-	-
	Sto6g4117	397	MobiDBLite	consensus disorder prediction	82	99	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto6g4117	Sto-Chr6	44642441	44643664	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto6g4117	90	397	Mechanosensitive Ion Channel Family	AT1G78610	37.647	3.63e-69	232

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto6g4117	K22048		-	gmx:100813521	502.286