Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4099 ATGGACATTTGTCTGATGAAATGGCAATGGACATGGCTTGTTTATGCTCTGctgatatatattgtaattaataaaaatgaagcaATCAGTCCTGATGGTGAGGCACTTCTCAGTTTCAGGACAGCTGTTGTTAACTCAGATGGTATCCTGTTACAGTGGAGGCCAGAAGATCCTGATCCATGCAAATGGAAAGGAGTAAGATGTGATCCAAAAACCAAGAGAGTGACTTATTTGAGTCTAGCTCGCCATAAGTTGAGTGGGTCTATATCACCTGACCTGGGGAGGCTAGAGCATCTGACTGTTCTTGCTCTTCATAACAACAATTTCTATGGAACAATTCCATCAGAATTGGGAAATTGCACTGAGTTGCAGAGAATATACTTGCAGGGCAATTACCTAAGTGGAGTGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTAAAAGCTTGGATATATCAAGTAACTCTCTCTCTGGGAATATACCTCCATCGCTTGGGAAATTGTATAATCTCAAAATTTTCAATGTTTCGACCAATTTTCTGGTTGGATCAATACCTTCTGATGGCGTGCTTGGTAACTTTACTGAAAACTCTTTTGTTGGAAATCGTGGTTTGTGTGGAGTGCAAATCAATGTAACATGTAAAGATGATGGTTCACCTACGACAAATCAATCTCCAACATTGGACCAAAATCAAAATGGAAAGAAGAAATATTCTGGCCGGTTGCTAATCAGCGCATCAGCAACTGTGGGTGCACTACTTTTAGTGGCTCTTATGTGCTTCTGGGGTTGCTTTCTTTATAAAAGGTTTGGTAAAAATGACAGAAAAAGTCTGGCAATGGATGTTGGTGGAGGAGCATCAATTGTGATGTTTCATGGAGATCTACCATATTCTTCAAAAGAAATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATTGGTTGTGGGGGATTTGGAACAGTTTACAAGCTTGCAATGGATGATGGGAATGAATTTGCTTTGAAAAGGATTGTCAAGTTGAATGAGGGTTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACACCGTTATCTAGTAAACTTACGAGGATATTGCAATTCACCCACATCAAAGTTGTTAATATATGATTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAAATCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCGAGGATCATACACCGTGACATAAAATCGAGCAATATTTTACTTGATGGCAACCTGGATGCTCGAGTCTCTGATTTTGGGCTTGCCAAACTTCTGGAGGATGAAGAATCTCATATCACCACTATCGTTGCTGGAACATTTGGTTATCTAGCCCCAGAGTATATGCAAAGTGGTAGGGCAACTGAAAAGACTGATGTTTACAGTTTTGGTGTCCTGGTACTCGAAGTGCTGAGTGGCAAGCGACCAACAGATGCATCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGCTGAATTTTCTCATTACGGAAAATAGGGCAAGAGAGATTGTTGATCCCCAATGTGAGGGAGTGCAGGTAGAGAGCCTCGATGCCTTGCTCTCTGTGGCTATTCAGTGTGTTTCTTCAAGTCCAGAGGATCGACCAACAATGCACCGAGTGGTCCAGGTGCTTGAATCAGAGGTCATGACCCCATGCCCAAGTGACTTCTATGATTCCAACTCTGAGTAG 1785 0.4084 MDICLMKWQWTWLVYALLIYIVINKNEAISPDGEALLSFRTAVVNSDGILLQWRPEDPDPCKWKGVRCDPKTKRVTYLSLARHKLSGSISPDLGRLEHLTVLALHNNNFYGTIPSELGNCTELQRIYLQGNYLSGVIPSEIGNLSQLKSLDISSNSLSGNIPPSLGKLYNLKIFNVSTNFLVGSIPSDGVLGNFTENSFVGNRGLCGVQINVTCKDDGSPTTNQSPTLDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKRFGKNDRKSLAMDVGGGASIVMFHGDLPYSSKEIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNEFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRAREIVDPQCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQVLESEVMTPCPSDFYDSNSE 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4099 594 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Sto6g4099 594 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Sto6g4099 594 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 593 IPR031071 GO:0004672|GO:0005524|GO:0030244
Sto6g4099 594 ProSiteProfiles Protein kinase domain profile. 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4099 594 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Sto6g4099 594 ProSitePatterns Protein kinases ATP-binding region signature. 315 341 IPR017441 GO:0005524
Sto6g4099 594 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Sto6g4099 594 SUPERFAMILY Protein kinase-like (PK-like) 293 576 IPR011009 -
Sto6g4099 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Sto6g4099 594 Gene3D Phosphorylase Kinase; domain 1 283 384 - -
Sto6g4099 594 Pfam Protein kinase domain 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4099 594 SUPERFAMILY L domain-like 30 196 - -
Sto6g4099 594 PANTHER RECEPTOR-LIKE PROTEIN 55 3 593 - -
Sto6g4099 594 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4099 Sto-Chr6 44541022 44550626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4099 1 585 Receptor kinase-like Gene Family AT2G35620 76.581 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sto6g4099 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4099 - - gmx:100819230 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4099 6 44541022 44550626 Sto6g4099 6 44541022 44550626 ECH