Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4096 ATGAGGCCACGCAAAGACGCAGATAAACGAAAATTCATCTCCGATCCCGAGCAACCCTTTTCCTCCTCACTGTCCTCGTCATCGCCGCCGCGGAGAATCCACCGCCTCCGCCGTCTATTGATTAAACTGTTACAGTGCGTAGCCATGGCAGGTCAATCTCGGAAGTGGATGCTATTGGTGGCCACCATATGGCTTCAAGCCTTCACTGGCACCAATTTCGATTTCTCGGACTACTCTTCCGCCCTCAAATCCGCCCTAAATATCTCTCAGGTTCAGCTCAACTACCTCGCCACCGCCAGCGACCTTGGCAAGGTATTTGGCTGGTCTTCCGGCCTCGCTCTCATGTATTTCCCCCTTTCCGTGGTGATGTTCATGGCCGCCTTCATGGGCTTCTTCGGCTATGGCCTCCAATGGCTCCTCCTCCGCAATTTCATTACCTTGCCCTATTGTCTGAATTTCCCGGTGAATCGACCCCTTGCACTATCACTCACCGTGAGTTACAATGGGGTAAGTGCAGCGCTCTACACGCTTGCAGCCAATTCAATAGATCCCTCGTCTAGTGAACTCTATCTACTTTTGAATGCTCTTGTTCCCCTTATCACTTCCTTAGCTGCACTAATCCCAATTCTTCGCCAGCCAGCTGTAGACCCTCTTCCTCCCGATGCACTTCATCGGGACTCAATGATTTTTCTGATATTGAACTTCTTTGCAGTTCTCACTGGCCTTTATCTTCTTCTCTTCAGTTCTTCTTCCTCTGATGCAACAACAACTCGGCTCTACTTTGGTGGAGCTATTTTCCTCCTTATCTTCCCATTATGTATTCCTGGCATTATCTATGCTCGAGATTGGTTCTATCGTTTCATACACTCTAGCTTTCGGATGGAAGGCTCAAGCTTCCTACTTGTCCATGTTGAAGATCTTGAGCTTCATAGGGATCTTCTTACCCGTCCAGATAGCCCTCATAGTCTTAGCAATGGTGATTCTGAAAGCCTGTTGAGTGAGAAAGGATCTGTGTATGGAAATCTGAACGCAAAAGAAAGCGATGGGTGTTGTACGACGATGATTGACCGGGATCAGTTGGCAATCCTAGGCCAAGAACACCCAGCTTCACTGGCTGTCCGAAGCAATAATATGGGACAGATTGCTCAGTCTCTGGGCCTGGGTTCAAATGTTTCCACAATTGTCACGCTCTATTCATCATTCTCCTTCTTTGGTCGCTTGCTTTCTGCTGGACCAGACTATATTCGTACTAAGTTCTACTTTGCGAGGACTGGGTGGCTAACTATTGGGCTTTTACCAACCCCAATTGCGTTCTTCTTGCTTGCCGCATCAGACAGTGCTGGAGCAGTTTATACAGGCAGTGCACTAATTGGGTTAAGCTCTGGGTTCATATTTGCAGCTGCTGTATCAATTACTTCTGAACTATTTGGACCTAACAGTGTGGGCGTCAACCACAATATTCTCATAACAAATATCCCCATTGGATCGCTTCTCTATGGCTTCCTTGCTGCAGTAATTTACGAGGCCAATGGGCATCGCTCGTCAAACTTAACTAATTCAGTAATGTGCATGGGAAGGCAGTGCTACTTCTGGACATTTGTGATGTGGGGATGCTTATCTGTCATTGGACTAGCTTCTAGTGTGCTGTTATTCTTAAGAACCAAGCACGCATATGATAATTTTGAAACCAGACGGATCTCAACACAAACAATTCTCTCTTAA 1722 0.4704 MRPRKDADKRKFISDPEQPFSSSLSSSSPPRRIHRLRRLLIKLLQCVAMAGQSRKWMLLVATIWLQAFTGTNFDFSDYSSALKSALNISQVQLNYLATASDLGKVFGWSSGLALMYFPLSVVMFMAAFMGFFGYGLQWLLLRNFITLPYCLNFPVNRPLALSLTVSYNGVSAALYTLAANSIDPSSSELYLLLNALVPLITSLAALIPILRQPAVDPLPPDALHRDSMIFLILNFFAVLTGLYLLLFSSSSSDATTTRLYFGGAIFLLIFPLCIPGIIYARDWFYRFIHSSFRMEGSSFLLVHVEDLELHRDLLTRPDSPHSLSNGDSESLLSEKGSVYGNLNAKESDGCCTTMIDRDQLAILGQEHPASLAVRSNNMGQIAQSLGLGSNVSTIVTLYSSFSFFGRLLSAGPDYIRTKFYFARTGWLTIGLLPTPIAFFLLAASDSAGAVYTGSALIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLLYGFLAAVIYEANGHRSSNLTNSVMCMGRQCYFWTFVMWGCLSVIGLASSVLLFLRTKHAYDNFETRRISTQTILS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4096 573 PANTHER NODULIN-LIKE/MFS TRANSPORTER 37 153 - -
Sto6g4096 573 PANTHER NODULIN-LIKE/MFS TRANSPORTER 152 374 - -
Sto6g4096 573 PANTHER NODULIN-LIKE/MFS TRANSPORTER 373 572 - -
Sto6g4096 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 152 374 - -
Sto6g4096 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 373 572 - -
Sto6g4096 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 37 153 - -
Sto6g4096 573 MobiDBLite consensus disorder prediction 1 30 - -
Sto6g4096 573 MobiDBLite consensus disorder prediction 1 15 - -
Sto6g4096 573 Gene3D MFS general substrate transporter like domains 373 562 IPR036259 -
Sto6g4096 573 Pfam Nodulin-like 152 275 IPR010658 -
Sto6g4096 573 Pfam Nodulin-like 55 150 IPR010658 -
Sto6g4096 573 SUPERFAMILY MFS general substrate transporter 378 556 IPR036259 -
Sto6g4096 573 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4096 Sto-Chr6 44520427 44524829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4096 1 567 Nodulin-like Gene Family AT1G31470 51.920 4.75e-172 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4096 - - gmx:100803546 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4096 6 44520427 44524829 Sto11g1340 11 12963025 12969962 CCT
Sto6g4096 6 44520427 44524829 Sto6g4096 6 44520427 44524829 ECH