Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4089 ATGAAGCTTTCTTCTTACTCATGTGCATTTTGGTGCATATGCCTTCATATGGTTCTTCTCTCTTCACCCAACCTACTATGTTTCCAACCTAAGATTACTGCAAATGCATTAGGAAACGACACAGACCAATCTGCATTGTTCAGATTTAAGGAAGCGGTAGAATATGATCCCTTTGATATCCTGACCTCTTGGAACAGTTCTACTCACTTTTGCATATGGCAAGGAATCACATGCAGCCTCAAACACCAAAGAGTCACAGCCTTGAACCTTCAAGGTTATAACTTGCGTGGGATCATACCACCTGACATAGGCAACCTCACCTTTTTAAGGTACATCAATCTTCAAAACAACAGCTTCTATGGTGAAATCCCACATGAAATAGGTCGTTTGTTTCGGCTGCAGCAACTGTATCTGACAAACAACACATTAATGGGACAAATTCCAACCAACTTGTCTGGATGTGCTGAACTGAGGACCTTGAGTTTGACAGGAAACAAGCTTGTTGGGAAAATACCTATGGAGCTTGGCTTTCTGACAAAGCTGGAACAGTTATATATTGCTGTGAACAATTTGACAGGTGAGATCCCAGCTTCTATAGGAAACCTTTCTTCTTTAACTGTTCTCTCCTTAGGAATCAATAACTTGGAGGGTAGTGTACCACAAGAGATAGGCCTTCTGAAGAACTTGACCCATTTGTCTATTGCATCAAATAAGCTATTTGGTATGCTTCCTTCTTCACTTTTCAATATGTCATCTCTCACCTTCTTCTCAGCTGGAGCCAACCAGCTCAATGGCTCTCTACCACCCAACATGTTCCTCACCCTCCCTAATCTCCAACAGTTTGGTATTGGTATGAACATAATCTCGGGAAACCTTAAAAACCTTTGGTCTCTGGCTATGGAGTACAATAATCTAGGAAGTGGTTCAGATAATGACTTGGATTTTTTGACGTCTTTGACGAATTGCACCAATTTGCAGGTACTGGATTTGAATTTGAATAACTTTGGAGGTTCTTTACCAACGTCCATAGCCAATTTGTCAAGTCAGTTGAGTCAGTTTTATATTGGTGGAAATCAGATTTTTGGGACTATACCTTCAGGATTAGAGAATCTCATTAACTTGATTGCCTTGGACTTTGAGTTCAACCATCTCACAGGGTCAATTCCAGCTTCATTTGGGAAGTTCCAGAAGATGCAATCATTGACTTTGAACGTGAACAAACTGTCTGGAGAAATCCCATTGTCCATTGGCAACCTTAGTCTGTTGTTTCAACTTGACTTGTCACAGAACATGCTAGAAGGAAGCATTCCTCCTAGTATTGGAAATTGCCAAAATTTACAGTACCTTGACCTTTCACACAACAACCTTAGTGGAGCTATACCCACAGAGGTCATTGGCCTTCCCTCCTTATCCTTGTTACTGAACTTATCTCAGAACTCACTTAATGGCAACCTGCCCATTGAGGTTGGCAACCTTAAAAGTATCAGTAAATTAGATGTTTCTAGGAATACTTTGTCCGGTCAAATTCCAGGAACAATTGGGCAGTGCATAAGCTTGGAATACCTTAACTTATTAGGGAATTCCTTCCAGGGAACCATACCTTCATCGTTGGCTTCATTGAAGGGCCTTCAGTATTTAGATCTCTCACAAAACAACTTGTCTGGATCAATTCCACAAGGTTTAAAGGATATTTCTGTTTTAGAGTACTTGAATGTTTCTTTCAATGAATTGGATGGTGAAGTACCAACAGAAGGTGTCTTTGGAAATGCAAGTGCAATATCATTGGAAGGAAACAGTGAACTCTGTGGGGGCATCACAGTGCTACATTTACCACCATGCCCTGTGGAAGTTGTCATGAAACGTGCTATATAttggaagagaaaaataaatagaagaagGTCTTCTACTTTATTCACAATGGACCAAAATCAACTTTCCAAGGTCTCATACCAGACACTGCACAAGGCAACTAATGGGTTCTCTCCTAATAACATGATAGGATCTGGTGCTTTTGGTTTTGTATACAAAGGAACTGTAGAGTCAGAAGGTAGAGTTGTTGCTATAAAGGTTCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCACTTAGAAATATCCGTCACAGAAATCTGGTTAAGATTTTAACTTGTTGCTCTAGTATGGATTACAATGGCAATGAATTTAAAGCTCTAGTGTTTGAATACATGGAAAATGGAAGCTTAGAGAAATGGTTGCATCCAGAGTCAGAAAGTGGAGATCAGTTAAGAACATTGGACCTTCTTCAGAGACTAAATGTTATCATTGATGTTAGTTCTGCACTGAAGTATCTTCACTATGAAAATGAGCAGAAAATTGTTCATTGCGATTTGAAGCCAAGCAATGTCCTTCTTGATAATGACATGGTTGCTCATGTGAGTGACTTTGGATTAGCAAGACTTCTATGGACTATCAATGGCATCTCTCGCGATCAAACTAGCACAGTTGGGATAAAGGGAACTATTGGCTATGCTCCTCCAGAATATGGAACAGGAGGTGAAGTTTCAACCCAGGGTGATGTGTACAGCTTTGGAATTCTTGTGCTTGAAATACTGATTGGAAGGAGACCAACAAATGAAATGTTCATAGATGGTCTTAATCTCCATAATTATGTCAAGAATGCCTTGCCAGATAAAGTTTTACAGATAGTGGACCCGGTCCTTCTCAGTAAAGAAATCAAACAAGCAGTTTCAGCAGCAGAAGAAGAAAACCACAAGAATGAGAAGAAGCTGATGAGTGAGATGCATGTAGAGAAGTGCCTGGTTGACCTATTTTCTATTGGACTTGCTTGTTCAGCTGAGTCAcccaaagaaagaataaatatgaGGGATGTTGCAAGGGAGCTTGATCTAATCAGAAGTGCTTTTCTTGCTGGTTGA 2934 0.3957 MKLSSYSCAFWCICLHMVLLSSPNLLCFQPKITANALGNDTDQSALFRFKEAVEYDPFDILTSWNSSTHFCIWQGITCSLKHQRVTALNLQGYNLRGIIPPDIGNLTFLRYINLQNNSFYGEIPHEIGRLFRLQQLYLTNNTLMGQIPTNLSGCAELRTLSLTGNKLVGKIPMELGFLTKLEQLYIAVNNLTGEIPASIGNLSSLTVLSLGINNLEGSVPQEIGLLKNLTHLSIASNKLFGMLPSSLFNMSSLTFFSAGANQLNGSLPPNMFLTLPNLQQFGIGMNIISGNLKNLWSLAMEYNNLGSGSDNDLDFLTSLTNCTNLQVLDLNLNNFGGSLPTSIANLSSQLSQFYIGGNQIFGTIPSGLENLINLIALDFEFNHLTGSIPASFGKFQKMQSLTLNVNKLSGEIPLSIGNLSLLFQLDLSQNMLEGSIPPSIGNCQNLQYLDLSHNNLSGAIPTEVIGLPSLSLLLNLSQNSLNGNLPIEVGNLKSISKLDVSRNTLSGQIPGTIGQCISLEYLNLLGNSFQGTIPSSLASLKGLQYLDLSQNNLSGSIPQGLKDISVLEYLNVSFNELDGEVPTEGVFGNASAISLEGNSELCGGITVLHLPPCPVEVVMKRAIYWKRKINRRRSSTLFTMDQNQLSKVSYQTLHKATNGFSPNNMIGSGAFGFVYKGTVESEGRVVAIKVLNLQKKGAHKSFIAECNALRNIRHRNLVKILTCCSSMDYNGNEFKALVFEYMENGSLEKWLHPESESGDQLRTLDLLQRLNVIIDVSSALKYLHYENEQKIVHCDLKPSNVLLDNDMVAHVSDFGLARLLWTINGISRDQTSTVGIKGTIGYAPPEYGTGGEVSTQGDVYSFGILVLEILIGRRPTNEMFIDGLNLHNYVKNALPDKVLQIVDPVLLSKEIKQAVSAAEEENHKNEKKLMSEMHVEKCLVDLFSIGLACSAESPKERINMRDVARELDLIRSAFLAG 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4089 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Sto6g4089 977 SUPERFAMILY L domain-like 350 603 - -
Sto6g4089 977 ProSiteProfiles Protein kinase domain profile. 660 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4089 977 PANTHER LRR RECEPTOR-LIKE KINASE 27 291 - -
Sto6g4089 977 PANTHER LRR RECEPTOR-LIKE KINASE 622 975 - -
Sto6g4089 977 PANTHER LRR RECEPTOR-LIKE KINASE 291 616 - -
Sto6g4089 977 Pfam Protein tyrosine and serine/threonine kinase 664 965 IPR001245 GO:0004672|GO:0006468
Sto6g4089 977 CDD STKc_IRAK 666 970 - -
Sto6g4089 977 ProSitePatterns Protein kinases ATP-binding region signature. 666 689 IPR017441 GO:0005524
Sto6g4089 977 Gene3D Ribonuclease Inhibitor 39 193 IPR032675 -
Sto6g4089 977 SMART LRR_sd22_2 322 348 - -
Sto6g4089 977 SMART LRR_sd22_2 226 252 - -
Sto6g4089 977 SMART LRR_sd22_2 540 572 - -
Sto6g4089 977 SMART LRR_sd22_2 443 469 - -
Sto6g4089 977 SMART LRR_sd22_2 178 204 - -
Sto6g4089 977 SMART serkin_6 660 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4089 977 Coils Coil 908 928 - -
Sto6g4089 977 SMART LRR_typ_2 178 202 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 564 589 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 371 394 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 226 250 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 444 467 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 492 516 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 106 130 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 419 443 IPR003591 -
Sto6g4089 977 SMART LRR_typ_2 540 563 IPR003591 -
Sto6g4089 977 Gene3D Phosphorylase Kinase; domain 1 620 741 - -
Sto6g4089 977 Pfam Leucine rich repeat 518 577 IPR001611 GO:0005515
Sto6g4089 977 Pfam Leucine rich repeat 180 239 IPR001611 GO:0005515
Sto6g4089 977 Gene3D Ribonuclease Inhibitor 291 386 IPR032675 -
Sto6g4089 977 Gene3D Ribonuclease Inhibitor 494 603 IPR032675 -
Sto6g4089 977 SUPERFAMILY Protein kinase-like (PK-like) 634 967 IPR011009 -
Sto6g4089 977 Gene3D Ribonuclease Inhibitor 387 487 IPR032675 -
Sto6g4089 977 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Sto6g4089 977 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Sto6g4089 977 PANTHER OS04G0122200 PROTEIN 622 975 - -
Sto6g4089 977 PANTHER OS04G0122200 PROTEIN 291 616 - -
Sto6g4089 977 PANTHER OS04G0122200 PROTEIN 27 291 - -
Sto6g4089 977 PRINTS Leucine-rich repeat signature 446 459 - -
Sto6g4089 977 PRINTS Leucine-rich repeat signature 540 553 - -
Sto6g4089 977 SUPERFAMILY L domain-like 40 318 - -
Sto6g4089 977 Gene3D Transferase(Phosphotransferase) domain 1 742 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4089 Sto-Chr6 44467778 44470969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4089 32 975 Receptor kinase-like Gene Family AT3G47570 44.345 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto6g4089 PK_Tyr_Ser-Thr 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4089 - - gmx:100786600 1131.7