Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4069 ATGCCTCAAAACTCCATAGCACCAAAGCCAGAATACAGCTGTAGTAACCCTGTAGAAGAAGGAActcaagagatgacagagcaCCGTAACTCCATTGTCCTTGCCTACCCCAAGCAAACCAGTGAACAACCCTTACCAAAATTGAATTTATACCCAATAACTTTGAAGTTTGAGGAACTGGTATACAAAGTTAAACTAGAGCAGAAAGGAGGGTGTTGCGGCAGTACATGGAGTTCCACAGAGAAGACCATATTGAATGGGATTACAGGTATGGTTTGCCCAGGAGAAATACTGGCTATGCTGGGGCCATCTGGTAGTGGGAAAACCACACTTCTCACAGCTCTTGGAGGCCGTCTCAATGGTAAACTATCTGGGAAGATCACATACAATAATCAGCCTTTCTCAGGTTCCATAAAAAGAAGAACAGGATTTGTGGCTCAGGATGACGTTCTATACCCTCATCTGACTGTTTTTGAGACTCTAGTATTCACTGCACTTCTAAGGTTGCCAAACAGCTTGACAAAGGATGAAAAAGTTGAGCATGTAGAGCGAGTTATCTCCGAGTTGGGACTGACTCGGTGCAGAGGAAGCATGATAGGAGGCCCACTTTTCAGAGGAATATCAGGTGGAGAGAAAAAGAGGGTGAGCATAGGTCAAGAAATGCTCATCAATCCAAGCCTTTTGTTGCTAGATGAGCCCACCTCAGGTTTGGACTCTACCACAGCTATGAGAATCATAAGCACAATCAAACGCCTGGCTAGTGGGGGTAGAACTGTTGTCACTACCATTCACCAACCCTCTAGTCGTCTCTACTATATGTTTGATAAGGTGGTCTTACTCTCTGAAGGCCGCCCCATCTATAATGGTCCAGCTTCTACAGCCTTGGACTACTTCTCATCCATTGGCTTTTCCAATTCTATGACCGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAATGGGATTGCCCCGGACTCCAAGCATGCAATTGAACAAAGTGAGAGCCTGGAGCAAGAAAGGAAGATGGTGAGAGAAGCTCTAATTTCTGCTTATGACAAGAACATAGCCACAAGGTTGAAAGCTGAGCTTTGCAGCTTGAATGTGAACTACAATATCACAAAAGATGCTTCTACAAGAAATGACCTAAAACCAGAGCAATGGTGCACAAGCTGGTGGTATCAATTCAAGGTACTGTTACAAAGGGGCCTCAGGGAGCGAAGGTATGAAGCTTTCAACAGGCTGAGAATATTTCAAGTCATCAGTGTCGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCCCACATAGAAGACCGGGTAGCCttgctctttttcttttctgttttctgGGGATTCTACCCTCTCTACAATGCAGTCTTCACATTTCCTCAAGAAAGAAGAATGCTGATCAAGGAACGGTCATCTGGAATGTACCGCCTTTCTTCCTACTTTCTGGCGAGAACAATAGGAGACATGCCTCTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTACTGGATGGGAGGGCTTAAACCTCACCCTGTGACTTTCATCCTTTCCCTTCTTGTGGTTCTTTACAGTGTTCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTCTTATGGAAGTCAAACAGGCCACCACTTTAGCATCTGTCACAACACTTGTATTTCTCATTGCCGGAGGTTACTACGTACAACAGATTCCTCCCTTCATTGTGTGGTTCAAGTACTTAAGCTACAGCTACTACTGCTACAAACTTCTCCTTGGTGTCCAGTACGATGAAGATGATGTTTATGAGTGCTCAAAGGGTGTCTTGTGCAAGGTTGTAGATTTTCCTCCTATTAAATCAATGGGTTTACATCATATGTGGATTGATGTGTCCATTATGGCTTTGATGTTGGTGGGTTATCGACTAGTAGCTTACATAGCACTACATAGAGTAAGGTAG 1968 0.4334 MPQNSIAPKPEYSCSNPVEEGTQEMTEHRNSIVLAYPKQTSEQPLPKLNLYPITLKFEELVYKVKLEQKGGCCGSTWSSTEKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVFETLVFTALLRLPNSLTKDEKVEHVERVISELGLTRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAMRIISTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGRPIYNGPASTALDYFSSIGFSNSMTVNPADLLLDLANGIAPDSKHAIEQSESLEQERKMVREALISAYDKNIATRLKAELCSLNVNYNITKDASTRNDLKPEQWCTSWWYQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDMPLELALPTAFVFIIYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYVQQIPPFIVWFKYLSYSYYCYKLLLGVQYDEDDVYECSKGVLCKVVDFPPIKSMGLHHMWIDVSIMALMLVGYRLVAYIALHRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4069 655 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524
Sto6g4069 655 Pfam ABC-2 type transporter 264 345 IPR043926 GO:0140359
Sto6g4069 655 Pfam ABC transporter 85 235 IPR003439 GO:0005524
Sto6g4069 655 CDD ABCG_EPDR 52 289 - -
Sto6g4069 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Sto6g4069 655 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 31 653 - -
Sto6g4069 655 SMART AAA_5 94 284 IPR003593 -
Sto6g4069 655 MobiDBLite consensus disorder prediction 1 26 - -
Sto6g4069 655 Gene3D - 74 301 IPR027417 -
Sto6g4069 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 653 - -
Sto6g4069 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 300 IPR027417 -
Sto6g4069 655 Pfam ABC-2 type transporter 393 599 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4069 Sto-Chr6 44317316 44319968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4069 84 283 Calmodulin-binding Proteins AT2G36910 30.000 3.30e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4069 K05681 - gmx:100780191 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4069 6 44317316 44319968 Sto6g4069 6 44317316 44319968 ECH