Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4064 ATGACCATTGATATGCCATCATCAATGGCCCAAAGTGAAAGGACAAACAGATCTTCCTTCAGCTCTAGCAATGGCAATGGGGATACTTCTTCACACAACTATGCTGCTAGTAGCAATGGTGATGACTATGACAGTGATAGCTCCAATTTTGCACCACCTACACCAGCAACTCTATCAATGGCTATTCCAGCAGAACTCGCTGGAGCTGTACCCTTAATTGACAGATTCCAGGTGGAtggatttttaaaattaatgcaGAAACAAATTCAATCTGCTGGGAAACGTGgatttttttctaaaagatCTGTAGGCTCCCAAGTTCGAGATAAATTTACATTTGAGGACATGATGTCTTTCCAAAAGATAATTTTGAAATACATGGGAGTTGATTCATCTGATCATGCAAATCCATTAAGTTTAGATGAAAGAGTTGAGCTTGTGGAGAAACTATGTAAGCACAGTTTGAAACGGTCTGAACTTCGAGACGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCCGAGAGGTCATACTTGATTAAAGCTTGGGAGCTGATGTATCTATGTGCATCTTCCATGCCTCCTAGTAAAGACATTGGGGGATATCTATCAGAGTATGTTCATAATGTAGCACATGGTGTGAGCACTGATTCTGAGATTCAAGCTCTAGCATTAAATACACTAAATGCTTTGAAGCGCTCTATCAAGGCTGGTCCCAGATATATTGTACCTGGGCGTGAGGAGATTGAAGCTCTGTTAACTGGGAGGAAGCTAACAACCATTGTTTTTTTCCTGGATGAAACTTTTGAAGAAATTACATATGACATGTCAACAACGGTTGCTGATGCTGTTGAGGTAATTGGTGGATGGGTTTCACTTGAGGAGTACATTGGGTTAGATGATAACAAATATATTGGGGATTTACTGGCTGAATTTAAGGCAGCAAAAGATCGAAGCAAGGGAGAAATTTTGCACTGTAAACTGATATTCAAGAAAAAGCTGTTTCGGGAATCAGATGAAGCTGTAACAGATCCAATGTTCGTGCAATTGTCCTATGTACAGTTGCAACATGATTATATTTTGGGTAATTATCCTGTTGGGAGAGATGATGCTGCCCAACTATCAGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGCGCACCTGAATCTTGCAATGACTGGAATTCACTTCTGGAGCGATTCATACCTAGACAAATTGCAATAACACGAGCCAAGCGGGAATGGGAGGTGGACATCCTTGCTTGTTATCATTCATTGGAACGTTTGGCCAAAGATGATGCAAGACAACAATTCCTGCGCATATTGAGAACACTTCCTTATGGGAATTCAATATTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTTTTGCCTGGACGAATAGTATTGGGCATTAACAAGAGAGGGGTTCATTTTTTTCGTCCAGTGCCAAAAGAATATCTGCATTCAGCTGAGTTAAGAGACATAATGCAATTTGGAAGTAGCAATACTgcagtattttttaaaatgcgAGTTGCAGGCATCCTTCACATTTTCCAATTTGAGACAAAGCTGGGTGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGTTGCGCCGTTATTCCAAAGCACGATCTGCTGCTTGTGGTTCTGTGAATGGTGTGAATGGAGATCTTTCTAACAATTTAAAGCCTTCCAATCTGGAGTTATATGAGAAGCGTGTTCAAGATTTATCAAAAGTTGTTGAAGAATCTAAACGGAATGCTGATCAATTGGTAGAAGAATTGCATGAAAAACAAAAGCAAGAAGAGAAAATGCAAGAAGATTTGGAAGGCTTGAAAGAATCTTTAAAGGCTGCTAAACAAAGTCTTGTGGAAGTTTCAAGTGATCGTGATAGGCTTAGATCATTATGCAATGAAAAAGATAAGTCTCTTCAGGCTGCTATAATGGAGAAAAGGAACATGGAAGCAAGGTTGGCCAAGATAAGTAATCTGATGAAAGAGAATGCTACCAAAAAGGATACTGTTGGAGCAAATAATGAAGTGTTACAAAAGGTTGAAGATGAACTAAAACTTACTGAAGATAAGCTCCATGCAGCAGAAGAAACTATCAAAAGACTAACAaacgaaaaattgattttggaAAGGAAGCTGTCAGAGCTTAAGAACAGAAATGCTGATGAGGTTAGTTTTCTGGAACGTAAGTTTGAGCAAGAATGCAAAGCCCTAAAGTCTCAAGTTCATGACCTTGAAAAGAAGCTTGAAGGGACTAGACAAGAATTAGTGGCAGTTGAGTTTACTCTGTCGGTCAAGGACTCTGAGTTTGCTGCAGTGCAGAATAATTTAAAGGAATTGGAAGAACTGAGAGAAATGAAAGAGGACATTGAGAGGAAGAATGAACAAACAGCTGCCTTATTGAAGATGCAAGGGACTCAACTAGCTGAAATGGAATTGCTTTATAAGGAGGAACAGCTGCTTAGGAAGCGTTACTTCAACACCATAGAAGATATGAAAGGAAAAATTAGAGTTTATTGCCGGCTGAGACCTCTTGGAGAAAAAGAGATTGCTTTGAAAGAAAGAGATGTTCTTACTTGTATAGATGAGTTTACAGTTGAACATCCATGGAAGGATGATAAACCAAAGCAGCACATATATGATCATGTGTTTGGTGGTGATGCCACCCAAGAAGATTATTTGGTGCAATCGGCTGTAGATGGTTACAATGTCTGCATATTTGCATATGGTCAAACTGGATCTGGAAAGACATTTACGATTTATGGATCCGAAAGCAACCCCGGGCTTACCCTACGTGCTACTGCAgaacttttcaaaattttaaggaGAGATAGtcacaaattttctttttccttaaaGGCATACATGGTGGAACTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAGAATGCAAAGCGTTTAAAGTTGGATATCAAGAAGGATTCAAAGGGCATGGTAGCTGTGGAGAATGTAACAGTTGTTTCAATAACCTCTATGGAAGAATTGAATAACATAATCCAAAGAGGATCTGAACAACGACATACCTCTGGAACACAAATGAATGTGGAGAGCTCAAGATCTCATCTTATATTATCAGTGATAATTGAAAGTACCAACCTTCAAAGTCAAGCAATTGGAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAGAAATCAGGGTCCTCAGGTAATCAACTTAAAGAAGCACAAAGCATCAATAAGTCATTATCAGCACTTGGGGATGTTATCAGTGCTTTGTCATCCGGTGGGCAACACATACCTTACAGGAATCACAAGTTAACTCTTCTGATGAGTGATTCACTTGGAGGCAATGCCAAAACTCTCATGTTTGTCAATGTATCTCCGGCAGAATCGAACTTGGACGAGACATACAATTCTCTAATGTATGCATCGCGTGTGAGATCGATTGTGAATGATCCGAGCAAGAATGTTAGTTCAAAAGAGGTGGCAAGATTGAAGAAGTTGGTTGCATATTGGAAGGAGCAAGCAGGTAGAAGGGGTGAGGATGAAGAGTTGGAAGATATTATGGAAGAAAGAGCAATAGATGGTCGCAATTCTATGTAG 3645 0.3833 MTIDMPSSMAQSERTNRSSFSSSNGNGDTSSHNYAASSNGDDYDSDSSNFAPPTPATLSMAIPAELAGAVPLIDRFQVDGFLKLMQKQIQSAGKRGFFSKRSVGSQVRDKFTFEDMMSFQKIILKYMGVDSSDHANPLSLDERVELVEKLCKHSLKRSELRDELFVQISKQTRNNPERSYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHGVSTDSEIQALALNTLNALKRSIKAGPRYIVPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEVIGGWVSLEEYIGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILAEIGFVSAPESCNDWNSLLERFIPRQIAITRAKREWEVDILACYHSLERLAKDDARQQFLRILRTLPYGNSIFFNVRKIDDPIGLLPGRIVLGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGILHIFQFETKLGEEICVALQTHINDVMLRRYSKARSAACGSVNGVNGDLSNNLKPSNLELYEKRVQDLSKVVEESKRNADQLVEELHEKQKQEEKMQEDLEGLKESLKAAKQSLVEVSSDRDRLRSLCNEKDKSLQAAIMEKRNMEARLAKISNLMKENATKKDTVGANNEVLQKVEDELKLTEDKLHAAEETIKRLTNEKLILERKLSELKNRNADEVSFLERKFEQECKALKSQVHDLEKKLEGTRQELVAVEFTLSVKDSEFAAVQNNLKELEELREMKEDIERKNEQTAALLKMQGTQLAEMELLYKEEQLLRKRYFNTIEDMKGKIRVYCRLRPLGEKEIALKERDVLTCIDEFTVEHPWKDDKPKQHIYDHVFGGDATQEDYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSESNPGLTLRATAELFKILRRDSHKFSFSLKAYMVELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVAVENVTVVSITSMEELNNIIQRGSEQRHTSGTQMNVESSRSHLILSVIIESTNLQSQAIGRGKLSFVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTLLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGEDEELEDIMEERAIDGRNSM 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4064 1214 Coils Coil 576 638 - -
Sto6g4064 1214 SUPERFAMILY Second domain of FERM 333 450 IPR035963 -
Sto6g4064 1214 CDD FERM_B-lobe 350 448 IPR019748 -
Sto6g4064 1214 Gene3D Kinesin motor domain 835 1165 IPR036961 -
Sto6g4064 1214 Coils Coil 691 732 - -
Sto6g4064 1214 CDD FERM_C_KCBP 452 558 - -
Sto6g4064 1214 Pfam MyTH4 domain 148 253 IPR000857 GO:0005856
Sto6g4064 1214 SUPERFAMILY Tropomyosin 574 794 - -
Sto6g4064 1214 SMART B41_5 256 455 IPR019749 -
Sto6g4064 1214 SMART kinesin_4 846 1171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 MobiDBLite consensus disorder prediction 1 51 - -
Sto6g4064 1214 Pfam FERM central domain 341 453 IPR019748 -
Sto6g4064 1214 Gene3D MyTH4 domain 87 257 IPR038185 -
Sto6g4064 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 848 1190 IPR027417 -
Sto6g4064 1214 SMART MyTH4_1 98 255 IPR000857 GO:0005856
Sto6g4064 1214 CDD KISc_C_terminal 846 1165 - -
Sto6g4064 1214 PANTHER KINESIN-LIKE PROTEIN 80 1194 - -
Sto6g4064 1214 SUPERFAMILY PH domain-like 455 543 - -
Sto6g4064 1214 ProSitePatterns Kinesin motor domain signature. 1063 1074 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto6g4064 1214 Coils Coil 653 673 - -
Sto6g4064 1214 Gene3D - 1166 1212 - -
Sto6g4064 1214 SUPERFAMILY Prismane protein-like 791 852 IPR011254 GO:0003824|GO:0016491
Sto6g4064 1214 Gene3D - 347 448 IPR014352 -
Sto6g4064 1214 Coils Coil 776 816 - -
Sto6g4064 1214 Gene3D - 453 560 IPR011993 -
Sto6g4064 1214 PRINTS Kinesin heavy chain signature 914 935 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 PRINTS Kinesin heavy chain signature 1033 1050 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 PRINTS Kinesin heavy chain signature 1064 1082 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 PRINTS Kinesin heavy chain signature 1113 1134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 ProSiteProfiles MyTH4 domain profile. 94 255 IPR000857 GO:0005856
Sto6g4064 1214 Pfam Kinesin motor domain 854 1163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 ProSiteProfiles Kinesin motor domain profile. 848 1163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g4064 1214 ProSiteProfiles FERM domain profile. 260 549 IPR000299 GO:0005856
Sto6g4064 1214 PANTHER KINESIN-LIKE PROTEIN KLP-3 80 1194 - -
Sto6g4064 1214 Coils Coil 741 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4064 Sto-Chr6 44263852 44272292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4064 28 1207 Calmodulin-binding Proteins AT5G65930 69.670 0.0 1738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4064 6 44263852 44272292 Sto6g4064 6 44263852 44272292 ECH