Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4061 ATGTGTCCACGGCCGTTGCTCCCCCTCACAACCGTCGCCTCCGCCGTTATTATCACCATTTTGCTTCTCTTTCCGGCGGCGACGTCCCAAGCTGAGATTCGAAAAACAGAGAACCTCGTCTTCGGCCCCTTTACCCCCTCCTCCGACTACCAAACCTTCCACGTCATCTCTCCCGCGTCTATCAACTTCGGAGCCCTCCAAATCACGCCGGACACCGCCGGAAACATCTCTCTCACCAACAACTCCGGCCGAGTCCTTTTCCCTCGACCCTTCAAGCTCTGGGACGACGACGACGGCCCAGACTTGAACGGAAAACTCGCTTCCTTCAACACTTCCTTCCTCATCAACGTCTTCCGCGTCAATAACGCCACTCCAGGGGAAGGCCTTGCTTTCATGATCGCTCCTTCTCTGGACAATCCTCCTCCCAACAGCTACGGTCAGTTTCTTGGTCTCACCAACTCCACCACCGACGGCAACCCCAGCAATCAATTCGTCGCCGTCGAATTGGACACTGTGAAGCAGGACTTCGACCCGGACGACAACCACATCGGACTCAACATTAACAGCGTTCGGTCGAAGGTGAATGTTTCATTGACCCAATTCGGGTTCCAGATCGCTCCGAATGGGACTCAATTCTACGTGGTGTGGATGGAGTACGATGGTGCACGCAAGGTGCTCGACGTATTTATGGCACCGCAAGCAGACAAGGATGCAGCCATTGTGGCGAAACCCGCGAAGCCTGTGTTGAGCTCAGATCTGGATCTGAAAAGCATAGTGAAACAGAGGTCTTACTTTGGTTTCTCTGCTTCGACTGGAACCACAGTTGAATTGAACTGCGTTCTGAGATGGAATATAACGGTGGAGATTTTAGCTGACAAGGGGGAAAGTGGGAGGGAGTTTGAGTTCGAGGAATTAAAGAAGGCCACGAACAATTTCGATGAGAAGAACAAGCTGGGGCAAGGTGGGTTTGGTGTGGTTTACAGAGGGAGTCTAGTGAAGGAGGATTTGGAAGTGGCTGTTAAGAAGTTCTCTAGGGATGATAACATGAAGAACCAGGACGATTTTCTGGCTGAGCTTTCCATTATTAACCGTCTCCGTCATAAACATCTCGTCCGTTTACTCGGTTGGTGCCACAAGAAGGGTATACTCCTACTAGTGTATGAGTTCATGCCCAACGGTAGCTTAGATAACCACCTTTTCTGCGAGGGGCCAAGCCCAAGCCCACTAAGCTGGGATCTAAGGTACAACATCATCCTAGGTGTGGCTTCAGCCTTACATTACCTGCACCACGAGTACGACCAAAAGGTGGTCCACAGAGACCTCAAGGCCAGCAACATCATGCTGGACTCCCACTTCAACGCCCGTCTCGGCGACTTCGGCCTGGCTCGCGCCCTCGACAATGAGAAAACCTCCTTCGTGGCTGAGCTGGAAGGCGTCCCCGGCACCATGGGGTACATCGCCCCCGAGTGCTTCCACACGGGCAAGGCCACCCGGCAGTCCGACGTCTACGGCCTGGGTGCTGTGTTGCTGGAGGTGGCGTGTGGTCAGAGGCCTTGGACCAACATCCAGGGCTTCAAGTTTTTGGTGGATTGGGTGTGGTTCCTTCATGGTGAAGGAAGGATTATGGAGGGTGTGGATAGGAGGATTGGGGATGATTATGTGGTGGAAGAGGCTGAGAGGGTTCTCAAATTGGGATTGGCTTGCTCTCATCCTATTGCTTCTGAGAGGCCTACAATGCAGACTGTGATTCAAGTTCTGTCTGGTTCTGTCCCTGTCCCTCATGTCCCTCCCTTTAAGCCTGCTTTCGTATGGCCTGCTGCTCTTCATCTTCAAAGCTTTGCTCTTACTGCCACCACTGCTACAACATCAACTACCACCTCCTCCACTCTTGACTTCACACCTCTTGATACACCTTCTTCTTCCAATCTTCAATACTCCCCTACCTCACAGATCAACAATAATgtagaataa 1971 0.5216 MCPRPLLPLTTVASAVIITILLLFPAATSQAEIRKTENLVFGPFTPSSDYQTFHVISPASINFGALQITPDTAGNISLTNNSGRVLFPRPFKLWDDDDGPDLNGKLASFNTSFLINVFRVNNATPGEGLAFMIAPSLDNPPPNSYGQFLGLTNSTTDGNPSNQFVAVELDTVKQDFDPDDNHIGLNINSVRSKVNVSLTQFGFQIAPNGTQFYVVWMEYDGARKVLDVFMAPQADKDAAIVAKPAKPVLSSDLDLKSIVKQRSYFGFSASTGTTVELNCVLRWNITVEILADKGESGREFEFEELKKATNNFDEKNKLGQGGFGVVYRGSLVKEDLEVAVKKFSRDDNMKNQDDFLAELSIINRLRHKHLVRLLGWCHKKGILLLVYEFMPNGSLDNHLFCEGPSPSPLSWDLRYNIILGVASALHYLHHEYDQKVVHRDLKASNIMLDSHFNARLGDFGLARALDNEKTSFVAELEGVPGTMGYIAPECFHTGKATRQSDVYGLGAVLLEVACGQRPWTNIQGFKFLVDWVWFLHGEGRIMEGVDRRIGDDYVVEEAERVLKLGLACSHPIASERPTMQTVIQVLSGSVPVPHVPPFKPAFVWPAALHLQSFALTATTATTSTTTSSTLDFTPLDTPSSSNLQYSPTSQINNNVE 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4061 656 Pfam Legume lectin domain 41 289 IPR001220 GO:0030246
Sto6g4061 656 SMART serkin_6 312 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4061 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Sto6g4061 656 ProSitePatterns Legume lectins beta-chain signature. 165 171 IPR019825 -
Sto6g4061 656 Gene3D Phosphorylase Kinase; domain 1 300 389 - -
Sto6g4061 656 MobiDBLite consensus disorder prediction 625 656 - -
Sto6g4061 656 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 296 623 - -
Sto6g4061 656 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 15 292 - -
Sto6g4061 656 CDD STKc_IRAK 318 586 - -
Sto6g4061 656 Gene3D - 41 299 - -
Sto6g4061 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 291 IPR013320 -
Sto6g4061 656 Pfam Protein kinase domain 313 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4061 656 SUPERFAMILY Protein kinase-like (PK-like) 297 586 IPR011009 -
Sto6g4061 656 CDD lectin_legume_LecRK_Arcelin_ConA 38 284 IPR001220 GO:0030246
Sto6g4061 656 ProSitePatterns Protein kinases ATP-binding region signature. 318 342 IPR017441 GO:0005524
Sto6g4061 656 ProSiteProfiles Protein kinase domain profile. 312 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4061 656 Gene3D Transferase(Phosphotransferase) domain 1 390 591 - -
Sto6g4061 656 PANTHER - 15 292 - -
Sto6g4061 656 PANTHER - 296 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4061 Sto-Chr6 44255327 44258247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4061 64 600 Receptor kinase-like Gene Family AT5G10530 36.439 5.78e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto6g4061 Pkinase 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4061 - - gmx:100780014 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4061 6 44255327 44258247 Sto11g1359 11 13147052 13151213 ECH
Sto6g4061 6 44255327 44258247 Sto6g4061 6 44255327 44258247 ECH