Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4056 ATGGATGTGTCAGCATCAACTTCGGATTCTTCTTCTACAATGATCATTCCTACTGATTCAGCAGAAGCTCAacctcctccttctcctcctccgcTTGATTCACTCACCACCGCCATCAACGGTTCTGCTTCCTCTCCTTTCAACTCTGACGAACCCCCCTCTTCATCCTCGCCTCCAGAACTCCAACTCCCTCTATCATGGCCACAGGACGGGAAGCTCACCCTCGATTGGATCCACAATCTCATGGCCTGCTTCGACTGGTCTTCCAGGAACCTCCCTCCCTCACAATTCCCTTCTGTTTTGCCCGTCCATGTCTTCGACTCTCTTATCCTCATCGCTTCCAAAATGCTTCACAAAGAACCCAACTGTGTACCCATAGACCCCTTTCAATCCCATTCCGAATCTGGAGACACAACTGCTGCCACCGTTGTTGTTGTGGGGGACGTTCATGGCCAATTGCATGATCTATTATTCCTCCTCAGAGATGCTGGTTACCCTGCtcaaaatcgtatttttgttttcaatggtGATTATGTTGATAGAGGAGCTTGGGGTCTGGAAATTTTCTTGCTCTTGTTGGCCTGGAAGGTGTTTATGCCGCATAACATGTATTTGCTTCGTGGGAATCATGAATCAAAATACTGTACATCTGTTTATGGCTTTGAGAAGGAAGTTCTGGCAAAGTATGGTGATAAGGGTAAGCATGCATACCGGAAATGTTTGGGATGCTTTGAAGGTCTTCCTTTGGCATCTGTTATAGCTGGACGTGTATACACTGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACTCCATCAAAGAGattgaaaggaaagaagaacCGTAAGATAAATCTCAATCCTGATATTAAAACTTTATCTCTTGGTTCCTTGGAGGAATTATCTAAGGCTCGACGATCAGTGCTTGATCCTCCTTGGGAAGGTTCCAACTTGATCCCTGGTGATGTGTTGTGGTCTGATCCATCGAAAAATCCTGGTCTTGCTCCAAACAAAGAAAGAGGTATTGGCTTATTGTGGGGTCCTGATTGCACAGAAGACTTCTTGAAGAAGTATAAGCTCAAGTTGATCATTAGGTCACATGAAGGTCCTGATGCAAGGGAAAAGAGGGATGGTCTTGATGGAATGACTGAAGGGTATACTATTGATCATATTGTGGAGTCTGGGAAGCTGATCACCCTTTTCAGTGCTCCGGATTACCCACAGTTTCAGGCAACAGAGGAGAGGTACAATAACAAAGGAGCCTATGTTGTACTTGAGCCCCCTAATTTTGACAATCCCATATTTCATAGCTTTGAAGCAGTTACTCCAAGGCCAAAGGCAAACCCGTATTACGATTATGAAGAGGTGATAGACTCGGATGAAGAATTGGACTTGGCATCCATGGTGACTGCCTGA 1416 0.4343 MDVSASTSDSSSTMIIPTDSAEAQPPPSPPPLDSLTTAINGSASSPFNSDEPPSSSSPPELQLPLSWPQDGKLTLDWIHNLMACFDWSSRNLPPSQFPSVLPVHVFDSLILIASKMLHKEPNCVPIDPFQSHSESGDTTAATVVVVGDVHGQLHDLLFLLRDAGYPAQNRIFVFNGDYVDRGAWGLEIFLLLLAWKVFMPHNMYLLRGNHESKYCTSVYGFEKEVLAKYGDKGKHAYRKCLGCFEGLPLASVIAGRVYTAHGGLFRSVTVTPSKRLKGKKNRKINLNPDIKTLSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEDFLKKYKLKLIIRSHEGPDAREKRDGLDGMTEGYTIDHIVESGKLITLFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNPIFHSFEAVTPRPKANPYYDYEEVIDSDEELDLASMVTA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4056 471 Gene3D - 96 462 IPR029052 -
Sto6g4056 471 MobiDBLite consensus disorder prediction 1 19 - -
Sto6g4056 471 Pfam Calcineurin-like phosphoesterase 142 370 IPR004843 GO:0016787
Sto6g4056 471 PRINTS Serine/threonine phosphatase family signature 142 169 IPR006186 GO:0016787
Sto6g4056 471 PRINTS Serine/threonine phosphatase family signature 172 199 IPR006186 GO:0016787
Sto6g4056 471 PRINTS Serine/threonine phosphatase family signature 205 229 IPR006186 GO:0016787
Sto6g4056 471 PRINTS Serine/threonine phosphatase family signature 242 268 IPR006186 GO:0016787
Sto6g4056 471 PRINTS Serine/threonine phosphatase family signature 302 329 IPR006186 GO:0016787
Sto6g4056 471 PRINTS Serine/threonine phosphatase family signature 396 412 IPR006186 GO:0016787
Sto6g4056 471 SMART pp2a_7 101 445 IPR006186 GO:0016787
Sto6g4056 471 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 53 468 - -
Sto6g4056 471 MobiDBLite consensus disorder prediction 1 65 - -
Sto6g4056 471 MobiDBLite consensus disorder prediction 34 63 - -
Sto6g4056 471 ProSitePatterns Serine/threonine specific protein phosphatases signature. 206 211 IPR006186 GO:0016787
Sto6g4056 471 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 53 468 - -
Sto6g4056 471 SUPERFAMILY Metallo-dependent phosphatases 98 449 IPR029052 -
Sto6g4056 471 CDD MPP_PP7 67 452 IPR041754 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4056 Sto-Chr6 44212942 44218024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4056 64 362 Calmodulin-binding Proteins AT5G63870 72.333 9.52e-163 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4056 6 44212942 44218024 Sto6g4056 6 44212942 44218024 ECH