Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4050 ATGCTCTATATTTCTACTGAAACCCGCAAACTTGAAGATTTTGTTCCGATGAACAGCATTCTTCTTAGAAAAGATCAGAAACATATATGTCACGCAAGGTGCCCTGACCCACCAGCTAAACTGCCTCTAGAATGGAACATAAGTACTATACTATCAAAaaggaaatttgatatttctggATTGCCTGAGCTTTCATTACAACCTGACCCAAAATGCGTACGAGACCGTGAAGAGTGGGGGAGATTTTTGAGTTTCCTGCACAAGCATGACATGATTGAATGGTATGATTCTAAGCCTACTCTGGATGAAGTCTCAACTTCATTTATGAACTTTCATCCAGTTGCTACTGCAGTATTTGAGCAGGACAGGTTCTACATACTGCCACCTGTTGAAGCCTCAACATCTAGCCTGGTCAGAGTTGCATATAATATGCCCAAAGCATTTTCTGTAGATAATCATTTGAAGGACCGTGAATCAGGTTCGCATCTGGCTGAGGGGAATGGTGGATCTGAACCTGTTGTTACAAGAGGTCCAGCAAGTGCTGCAAATTTATGCCCCCCCTCCTCGGCTCATAAATTTTCTCAAGTTCAAGATGGTGTTTGTAATTCTACGGCTGAACTGTGTAGCAAATCTCATTCACATGAGGTGAAGGACAGTCTCTCCCAGAAAAATTACGTCCGGGTAAACCCAAGCTACTTGAGAACTCTGGGTCAGGCTCATTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCGAGAGATGCCAAAGCAACTAAGATGGACATTTTTATAGATATgataaaattgaagaattctGGAAAGGATGAACCTATGCTGTCATTTATTGATGATGGCCACGGAATGGGATATGAAGAAATTTTGAAAATGGTTTCTTTTGGGCACAAGCAACCTGTTGGTGATGTTCCAGATCGCATTGGCAGATTTGGTGTTGGATTCAAGACTGGAGCAATGAGGCTTGGCAGCGATGCTCTTGTTTTAACCCAGACTACTAATTCTAGATGTATAGCTTTCCTTTCACAGGCTTTGAATGAAGGAAAGGAGAATATTGAGATCCCCATAGTTAGTTACCATCGATATGGACAGCGTATGGAAGTGGATACAAATGTTCACCCTGAAGCATTGGCAAAATACAACTTGAAGGCTATTCAAGAATTTTCACCGTTTAATAAGTATCTTATTGGTGAAAAGGCAGCGTTGTTTTCTGGTGGCACAGGAACACAAATTTACATATGGAACCTGGATAAATGGGGATCAGATTATTGTTTGCAATGGTGTAATGGATTGAAAGGTGGCAGCTCTTTCCACCAAGGTGACATTTTCATCCGCTCAAGAAGGATCAGGTCTCGCCTTGGTCAAATCAGCCATAAGGTTCCTTTGGATTATTCCTTAAGATCCTATTTAGAGCTTATATTCTTAGTTCCAAGGATGAAGATCAGTGTTCAACATGCACCGGTTAGAAGCCGACCACTAGGAAATTTTCTTACTAAAACTGTTATTGAAAATGATTGTATCTTGGGAAAGCGTGTTCACTTGACTCTAGGATTCAGTCAATTAGAATGGGAGCAGGCAAACTCTGGAATATTTTTGTATTGGCATGGTCGTTTGATTGAGGCTTACAAGAGAGTTGGAGGCATGGTTCATAATGCAGATGTCTGTCGGGGTGTAATTGGTGTCATAGATGTGACTGATTTAATGGATGATGGGGATGGTCGTGTCTGGGTGCATAACAACAAGCAGGGATTCCAGGACTGTGAAGCATATGCACATCTGGAGCTCTGGCTTGGTAAAAAAGCAGATGAATACTGGGACAATAACTTCGATTCACTTAAGTTGGACAAGGACAATTGTCTCTACAAACCAGATCTTGAATGGGTACAATGTGACAAGTGCAGAAAATGGAGGATGTTGCCTCCTGACTTTGACGCCAGAATGTTACCTCCACAATGGTTTTGTTATATGGAGCCCTTGAAAGGACAATGTGCGGCCCCTGAACAGAAAATGGAGAGCGGCGTCGTCACTATTTCCACAAAGCGGTCTGGATATGATTGCATGAAGAATGGTCCTTATTGTGGCAAGTTGGATGTTATGAAGGATTCTGACGCCTCAGGTGACAATTTGGCCAAGTCTGAGGATGCTAAACGTCCTGCGTTGAAAAGATTGAGAAAGGGAATTCCGACGGCCGCAGAAGTAAAATAA 2226 0.4155 MLYISTETRKLEDFVPMNSILLRKDQKHICHARCPDPPAKLPLEWNISTILSKRKFDISGLPELSLQPDPKCVRDREEWGRFLSFLHKHDMIEWYDSKPTLDEVSTSFMNFHPVATAVFEQDRFYILPPVEASTSSLVRVAYNMPKAFSVDNHLKDRESGSHLAEGNGGSEPVVTRGPASAANLCPPSSAHKFSQVQDGVCNSTAELCSKSHSHEVKDSLSQKNYVRVNPSYLRTLGQAHSGWIFGGIAELVDNSRDAKATKMDIFIDMIKLKNSGKDEPMLSFIDDGHGMGYEEILKMVSFGHKQPVGDVPDRIGRFGVGFKTGAMRLGSDALVLTQTTNSRCIAFLSQALNEGKENIEIPIVSYHRYGQRMEVDTNVHPEALAKYNLKAIQEFSPFNKYLIGEKAALFSGGTGTQIYIWNLDKWGSDYCLQWCNGLKGGSSFHQGDIFIRSRRIRSRLGQISHKVPLDYSLRSYLELIFLVPRMKISVQHAPVRSRPLGNFLTKTVIENDCILGKRVHLTLGFSQLEWEQANSGIFLYWHGRLIEAYKRVGGMVHNADVCRGVIGVIDVTDLMDDGDGRVWVHNNKQGFQDCEAYAHLELWLGKKADEYWDNNFDSLKLDKDNCLYKPDLEWVQCDKCRKWRMLPPDFDARMLPPQWFCYMEPLKGQCAAPEQKMESGVVTISTKRSGYDCMKNGPYCGKLDVMKDSDASGDNLAKSEDAKRPALKRLRKGIPTAAEVK 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4050 741 ProSiteProfiles Zinc finger CW-type profile. 628 678 IPR011124 GO:0008270
Sto6g4050 741 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 17 737 IPR045261 GO:0016887
Sto6g4050 741 MobiDBLite consensus disorder prediction 711 728 - -
Sto6g4050 741 Gene3D - 621 679 - -
Sto6g4050 741 Pfam Morc6 ribosomal protein S5 domain 2-like 471 612 IPR041006 -
Sto6g4050 741 PANTHER OS06G0622000 PROTEIN 17 737 - -
Sto6g4050 741 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 236 407 IPR036890 -
Sto6g4050 741 MobiDBLite consensus disorder prediction 711 741 - -
Sto6g4050 741 Pfam CW-type Zinc Finger 633 675 IPR011124 GO:0008270
Sto6g4050 741 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 371 - -
Sto6g4050 741 Gene3D - 214 401 IPR036890 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4050 633 675 B3 DNA Binding Superfamily AT4G32010 45.652 5.30e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4050 - - gmx:100782161 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4050 6 44161063 44169773 Sto6g4050 6 44161063 44169773 ECH