Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4037 ATGAAATATCGGTTTCTTTGCATTTCAAGCCTTCTGATCATATTGTCAATCGTCGTGTTTTCGAGCTTAACTGGTGATGTATCCGAATCCAAGTCAGAGAGCTCCCAAGTCTCTCTTGTGGGTCATTATGAGGAAGGCTTTGACGGCTTAGCTCTACCTGCGGCCCGCTCTCTTTTGTCTCATCCATCTAAGCCTAGTACAGCTCTAATTGCTGCCCCAGATCAAAATGGGACAATACATTTGGTGGAGAGTGGCTCCATGCGGATAATATGGTCATTTCCAACAGGATCACCAATTTACGGTTCATATCAAGCGTCTCTCAACAAGGATAACGAAAATATTTCTGGCCTAAGTAGTGAGTTCATAGAAGTCGGAGATGACTGGGGATTATATCAAAGAAAGTCCTTTGGTAAAATGAGGCTTTTAACATCTATTGAAGATGTTGTTAGAGCTACACCTAAAATATCAAATGATGGAGTTGTTACACTTGGATCTAAAAGAATCACTGTTTTTGAAGTTGATGCTAAAACTGGAAGGATCTTTCGAAGTTATACTGCATCTGATTTTGATAATTCCTATGCACTGTCGAGTGGGAATAGGCAAAGTGTTCAAAATGTTATGACGAATAGAAATCAGGAGCTGGTAAAGACTGACCCTCTGAAGCTTAATATGCCGGAGCCACTGCTCATGTTATTCAGGACCGATTATTCTCTACAGGCTGTTGGTCCTGGATCAGAAAAGGTTGTATGGAGTATGACAGTAGCTGAATTTGAAGCTGTATTTTATTGCCAACATGAAAATCCATCTGGTGCGGCTTCATTTGATTCAGAGGGCAAGCATGCTTCTGACATTGGCCTGGATTTTGCTTTGCCATACCCGtgtcaagagaaaaaaaaggtcTACCGCCTGCCCAAAAATTTTCTGCTACAACCTTCAATCATTGAGACACTACCTGAGGCTgatcatgaaaataaaatgcttCCAATGCCTTCATCAAATCTTATGCTTCCTTCGCAGCCTAATAATGATAGATTTTTAATTGGCCCCGATGAAGTTAAAATGCTTCCCATGCCTGTGCCAAATTCTTTGCCTTCTCTGCAGCCAGAAACGGGCTTCTATGTCAACAATGATAACGCAGTTGATCTCCCTCAGCCTCCCAGAGAGATTACTGTACCTGGGGAAGTTGATCTGAACAGGGTGAAAGCATGGTCAACAATATTGCCTCTAATGTTGTTTATAGTCATTCTCCTGGTCTTTTCAATTTACTACTATTTTCTGCtgtttaaaaaacaaattaatttgaaaGACCAAAACAATGAGTTTGATTCAAAAAGTACTCctaagaaaaagaagatgcgTAAGTCTGGAAAAAACAATGGCACTGTTGACAGAAAGGATAAGCATTTGTCATCAGAAGATGAGGATGTAATGGCACGTAGCAGAGCTGATAAGGAATCTTGGCAGCATTTCAGTAAAGTTGATGAATGTGCTGATGGCCGCAGGATTGGTAAGCTATTTGTATCAAATAAAGAAATTGCTAAGGGAAGCAACGGTACTATTGTTCTAGAGGGAATATATGAATGTCGAGCAGTTGCTGTAAAACGACTTGTTCAGGCTCATCATGATGAGGCCTTcaaagaaattcaaaatctcATTGCATCTGACCGTCATTCAAACATTGTCCGATGGTATGGGGTGGAATATGATCAAGATTTTGTTTACCTTGCCCTGGAACGTTGTACATGCAACTTAGATGATTTGATTCAGATTCACTCAGATCTTTCAGAAAACCCAGTGTTTAACAAGAATCAAGCTTTGATAAAGGCCCAGTTGGAGACAGGAAAGCACAATATGCAAAATCTTTGGAAAGCAAATGGTTTCCCATCACCTCTATTATTGAAGTTGATGAGGGATGTGGTTTCTGGGCTTTGTCATTTGCATGAACTGGGAATAGTACATCGGGATTTGAAaccccaaaatattttaataatcaaGGAAAGATCTCTATGTGCGAAGCTTTCTGATATGGGCATTAGTAAACGCCTTCTTGAAGATATGTCTTCTTTTGGTTATAATAATACAGGCTGTGGCAGTTCAGGTTGGCAAGCGCCAGAACAGCTTGTTAAAGGACGCCAAACACGATCTGTAGATTTATTTAGTTTAGGCTGTGTCCTCTTCTTCTGCATAACTGGAGGAAGACATCCATTTGGAGAACGTATTGAACGTGATGTCAATATTGTGAAAAATCAGAAAGACCTTTTCTTGGTGGATTTCATTCCTGAAGCTGAGGACCTTATTTCTTGTTTGTTAAACCCGGACCCTGATCTAAGGCCCAAGGCAGTTGAAGTATTGCACCATCCTTTTTTCTGGGATTCCGAGATGAGACTTTCATTTCTTCGCGATGCCAGTGACAGAGTGGAACTGGAAGATAGAGAGACTGGATCTGATCTTTTGAAGGCATTGGAAAGTAGTGCACCTGTGGCCTTGGGTGCAAAATGGGATGAAAAGATGGAACCAGCATTCATCAATAACATCGGCCGTTACCGGCGATATAAATATGACAGTGTTCGAGACTTGTTACGAGTCATGAGAAACAAGCTGAATCACTTTAGAGAATTGCCTCAAGAAATTCAGGATCTCGTAGGACCTGTTCCAGAAGGATTCAATGACTACTTCGCTAATCGATTCCCCAGACTCTTGATTGAAGTGTACAAAGTCATATGCAAATATTGCAAGGCGGAGGAATGTTTTCAGAGGTATTTTAAACACGTTGAATAG 2778 0.3942 MKYRFLCISSLLIILSIVVFSSLTGDVSESKSESSQVSLVGHYEEGFDGLALPAARSLLSHPSKPSTALIAAPDQNGTIHLVESGSMRIIWSFPTGSPIYGSYQASLNKDNENISGLSSEFIEVGDDWGLYQRKSFGKMRLLTSIEDVVRATPKISNDGVVTLGSKRITVFEVDAKTGRIFRSYTASDFDNSYALSSGNRQSVQNVMTNRNQELVKTDPLKLNMPEPLLMLFRTDYSLQAVGPGSEKVVWSMTVAEFEAVFYCQHENPSGAASFDSEGKHASDIGLDFALPYPCQEKKKVYRLPKNFLLQPSIIETLPEADHENKMLPMPSSNLMLPSQPNNDRFLIGPDEVKMLPMPVPNSLPSLQPETGFYVNNDNAVDLPQPPREITVPGEVDLNRVKAWSTILPLMLFIVILLVFSIYYYFLLFKKQINLKDQNNEFDSKSTPKKKKMRKSGKNNGTVDRKDKHLSSEDEDVMARSRADKESWQHFSKVDECADGRRIGKLFVSNKEIAKGSNGTIVLEGIYECRAVAVKRLVQAHHDEAFKEIQNLIASDRHSNIVRWYGVEYDQDFVYLALERCTCNLDDLIQIHSDLSENPVFNKNQALIKAQLETGKHNMQNLWKANGFPSPLLLKLMRDVVSGLCHLHELGIVHRDLKPQNILIIKERSLCAKLSDMGISKRLLEDMSSFGYNNTGCGSSGWQAPEQLVKGRQTRSVDLFSLGCVLFFCITGGRHPFGERIERDVNIVKNQKDLFLVDFIPEAEDLISCLLNPDPDLRPKAVEVLHHPFFWDSEMRLSFLRDASDRVELEDRETGSDLLKALESSAPVALGAKWDEKMEPAFINNIGRYRRYKYDSVRDLLRVMRNKLNHFRELPQEIQDLVGPVPEGFNDYFANRFPRLLIEVYKVICKYCKAEECFQRYFKHVE 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4037 925 SUPERFAMILY Protein kinase-like (PK-like) 498 803 IPR011009 -
Sto6g4037 925 Pfam Ribonuclease 2-5A 795 921 IPR010513 GO:0004540|GO:0006397
Sto6g4037 925 Gene3D KEN domain 792 925 IPR038357 -
Sto6g4037 925 ProSiteProfiles Protein kinase domain profile. 506 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4037 925 SMART serkin_6 506 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4037 925 Gene3D Transferase(Phosphotransferase) domain 1 611 791 - -
Sto6g4037 925 MobiDBLite consensus disorder prediction 439 476 - -
Sto6g4037 925 SMART PGNneu 854 908 - -
Sto6g4037 925 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 29 921 - -
Sto6g4037 925 PANTHER IRE1-RELATED 29 921 IPR045133 GO:0004521|GO:0004674|GO:0030968
Sto6g4037 925 Pfam Protein kinase domain 508 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4037 925 Gene3D Phosphorylase Kinase; domain 1 492 578 - -
Sto6g4037 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Sto6g4037 925 CDD RNase_Ire1 793 921 - -
Sto6g4037 925 ProSiteProfiles KEN domain profile. 792 923 IPR010513 GO:0004540|GO:0006397
Sto6g4037 925 MobiDBLite consensus disorder prediction 456 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4037 Sto-Chr6 44079613 44084730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4037 532 788 MAP Kinase Kinase Kinase AT3G06030 27.586 6.41e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Sto6g4037 Pkinase 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4037 K08852 - gmx:100788389 1110.9