Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4035 ATGAATGATATTAAAGGAGTTCTTGCCTTGCGTATGTACACCCCAGATTCAGAAACCAAAAGGGTTTTTGTTTCTAGGTGGATCAACCTAACGAGGGAAAAAGCTGTTGATCAAGGACCATTTGGGTTGAACGTGTACGGTCTTTATGCCTATGATACAGTCTGGGTTCTGGCATATGCACTTGATGCATATTTTAAGAATGGAGGAACTTTGTCATTTCCAAATAATTCAACTCTGAACATGTTAAAAGGGAATAATACTCTACATCCTGACATTATAGGGGTCTTTTCTAATGGAAATGGGTTGCTTCAGAACATTCAAGAGGTCAACATAACTGGTTTAACTGGTCAACTAATGTTTAGTCCAGATGGAAACCTGGAGCATCCTGCATATGAAATCATCAATGTGATTAAAACTGGGATTAGGAGGATTGGGTTTTGGTCGAATTCCCTTGGCCTCCACACTGGGGAAGAACCTAACCATTTCAACTCCAATAGAGGACTATATAATGTCACTTGGCCCGGTCAGACAAATAATCAAACACCTCGTGGATGGGTTTTTGCAAGCAATGGAAGGCCTTTGAGAGTTGGGGTGCCAGTCAGAATCAGCTACCATGAATTTGTGTCAAAAGTTGAAGGCCCAGAGATGTTTAGTGGGTATTGCATAGATGTGTTCACAGCCGCAATCAAACTTTTGTCCTATCCAGTTCCATACAAGTTCATCCCCTTTGGAGATGGCAGAACCAATCCATCAAACTCAGAGCTTCTGCAGAAGATCACCACTGGTGAATTTGATGCTGTGGTTGGAGACATCACCATAACCACAAACAGAACAAAGATTGTGGATTTCACACAGCCATACATAGAGTCAGGCCTTGTGGTGGTGGCTCCTATCAGGAAATTGTACTCCAGTGCATGGGCTTTCTTGAGGCCATTTACTCCATGGATGTGGTTTGTCACAGGATTATCTTTCTTTGTTGTGGGAGCTGTTGTGTGGATTCTAGAACGTCGCATAAACGACGACTTTAGGGGCTCTCCTAGAAGGCAGCTTGCCACCATTATATGGTTTAGCTTCTCAACCCTATTTTTTTCACACAGTAAGTGA 1104 0.4248 MNDIKGVLALRMYTPDSETKRVFVSRWINLTREKAVDQGPFGLNVYGLYAYDTVWVLAYALDAYFKNGGTLSFPNNSTLNMLKGNNTLHPDIIGVFSNGNGLLQNIQEVNITGLTGQLMFSPDGNLEHPAYEIINVIKTGIRRIGFWSNSLGLHTGEEPNHFNSNRGLYNVTWPGQTNNQTPRGWVFASNGRPLRVGVPVRISYHEFVSKVEGPEMFSGYCIDVFTAAIKLLSYPVPYKFIPFGDGRTNPSNSELLQKITTGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKLYSSAWAFLRPFTPWMWFVTGLSFFVVGAVVWILERRINDDFRGSPRRQLATIIWFSFSTLFFSHSK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4035 367 Gene3D - 188 305 - -
Sto6g4035 367 Pfam Receptor family ligand binding region 4 137 IPR001828 -
Sto6g4035 367 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 366 - -
Sto6g4035 367 SUPERFAMILY Periplasmic binding protein-like I 5 185 IPR028082 -
Sto6g4035 367 SUPERFAMILY Periplasmic binding protein-like II 181 321 - -
Sto6g4035 367 Gene3D - 306 367 - -
Sto6g4035 367 PANTHER GLUTAMATE RECEPTOR 2 366 - -
Sto6g4035 367 Pfam Bacterial extracellular solute-binding proteins, family 3 211 297 IPR001638 -
Sto6g4035 367 SMART GluR_14 195 358 IPR001320 GO:0015276|GO:0016020
Sto6g4035 367 Gene3D - 11 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4035 Sto-Chr6 44066094 44067391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4035 1 367 Ion Channels AT1G42540 55.053 1.97e-139 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4035 K05387 - gmx:100790502 568.155