Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4034 ATGGAAGATCGAAACGGTGATACATTGGGAAATTTGAATCAGTTTAGTGGGAAACCCCCTAGAGACCATTCGGCTTTGCGATATTGCACCAGCTCCACCTGGTTAGCAGAATCGCAAGATTATGGGATTACTAGGTCTAAATCATCCCCAGTAGAAAAATCAGACTTCTCTCCTGTATTTCGATCTGGAAGCTGTTCTGAGAGAGGACCAAAGCAATACATGGAGGATGAATACATGTGCGTTGATAATCTCCATGAATATCTTAGTCCAGCAACTCAGATCCCTTCTCCAGGGGCATTTTATGGGGTCTTTGATGGACATGGGGGTATTGATGCAGCATCATTCATCAGAAACAACATCTTAAAGTTCATCACGGAAGATTCTCAATTCCCAACTGGCATAAAAAAGGCTGTAAAGACTGCCTTTTCCAGGGCTGATCATGCATTTGCTGATGCAAGTGCCCTTGATAAGTCATCTGGCACCACTGCTCTCATTTCCTTCGCCCTAGGAAGGATCATGTTAATTGCGAATGCAGGGGATTCTCGTGCTGTATTGGGCAAAAGGGGCAGAGCCATTGAACTTTCTAAAGACCATAAACCAAACTGCACTTCAGAAAGACTCAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGCTACCTCAATGGCCAACTATCAGTAGCACGTGCCCTTGGGGACTGGCACATCAAGGGTTCTAAAGGTTCTAAAAGTCCATTAAGCTCTGAGCCTGAGCTGGAAGAGGTTGTGCTCACAGAAGAAGATGAGTTCTTGATAATGGGGTGTGATGGATTGTGGGATGTGATGAGCAGCCAGTGTGCTGTGACAATGGTGAGGAAGGAGCTGATGCAGCATAATGATCCCACCAAGTGCGCCAAGGCGCTCGTGGCCGAGGCACTACAACGCAACACGTGTGATAATCTGACAGTTGTAGTGGTGTGCTTCTCCAAAGATCCACCTCCTAAGATTGAAATTCCCAGAAATCATAGGAGGAGGAGTATATCAGCTGAAGGCGTGGATCTTCTCAAGGGGCCTTCTTATCTTGTACTGTTTGATTATTTGAAGCAGCAACAAGAAGCTTCAGCTCAAAAATTAAAGCCAAACTCAAGATATGGCTCCTCTTGTTCACAACCACAACGTAACTCTGGTTCAGCTCATTTCCCCACTTTGTGTGGCGAGAGGCGACACAAATACAAGAACGTTTAA 1224 0.4542 MEDRNGDTLGNLNQFSGKPPRDHSALRYCTSSTWLAESQDYGITRSKSSPVEKSDFSPVFRSGSCSERGPKQYMEDEYMCVDNLHEYLSPATQIPSPGAFYGVFDGHGGIDAASFIRNNILKFITEDSQFPTGIKKAVKTAFSRADHAFADASALDKSSGTTALISFALGRIMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEVVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPTKCAKALVAEALQRNTCDNLTVVVVCFSKDPPPKIEIPRNHRRRSISAEGVDLLKGPSYLVLFDYLKQQQEASAQKLKPNSRYGSSCSQPQRNSGSAHFPTLCGERRHKYKNV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4034 407 MobiDBLite consensus disorder prediction 368 395 - -
Sto6g4034 407 CDD PP2Cc 60 321 IPR001932 -
Sto6g4034 407 SMART PP2C_SIG_2 76 321 IPR001932 -
Sto6g4034 407 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
Sto6g4034 407 PANTHER PROTEIN PHOSPHATASE 2C 7 343 IPR015655 GO:0004722|GO:0006470
Sto6g4034 407 ProSiteProfiles PPM-type phosphatase domain profile. 61 321 IPR001932 -
Sto6g4034 407 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 7 343 - -
Sto6g4034 407 SMART PP2C_4 51 319 IPR001932 -
Sto6g4034 407 Gene3D - 42 325 IPR036457 -
Sto6g4034 407 MobiDBLite consensus disorder prediction 1 24 - -
Sto6g4034 407 MobiDBLite consensus disorder prediction 368 392 - -
Sto6g4034 407 Pfam Protein phosphatase 2C 62 313 IPR001932 -
Sto6g4034 407 SUPERFAMILY PP2C-like 53 322 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4034 Sto-Chr6 44059921 44061565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4034 46 350 PP2C-type Phosphatase Gene Family AT3G51470 75.738 1.39e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4034 K14803 - zju:107424335 528.094