Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4031 ATGTCGTGCTCCTCGTCCTCAGGGTCGGAGGAAGATGATGAGGGCTTCGAATCCTATAGGAAAGGAGGCTACCATGCCGTCAGGGTCGGCGATCAGTTCGCCGGCGGAAGGTATATAGCACAGAGGAAGCTCGGTTGGGGTCAGTTCTCAACCGTCTGGCTTGCTTACGATACTCGCACCTCTACATATGTTGCTCTTAAAATCCAGAAAAGTGCAGCTCAATTTGCTCATGCTGCCCTTCATGAGATTGATGTTCTTTCCGCCATTGCTAATGGTGACCCTTCGAATTCAAAGTGTGTTGTCCATTTGATCGACAACTTCAAACACACAGGTCCAAATGGGCAGCACCTTTGTATGGTCCTTGAGTTTCTTGGTGATAGTTTGCTTCGTCTGATCAGATATAACCGTTACAAAGGCCTTCCATTAAATAAAGTTAGGGAGATTTGCAAATGCATTTTAATTGGTCTGGATTACTTGCATAGAGAACTTGGTATACTCCACACTGATTTAAAACCTGAAAATATTCTTCTCTTTTCCTCAATTGATGCTTCCAAAGACCCCGTTCGATCTGGACTCTCTCCAATCCTAGAGAGGCCTGAGGGGAACCCAACTAGTGGAGTTACTAGTCTTATTGAGAAAAGGTTGAAAAGGAGGGCCAGAAGAGCAGTTGCTAAGATATCCGAAAAACGTGCTTCAATGGGGGGAACTGTAGAAGCTCGAAAGTCTGATAGAAATATTGATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCATGTTGGGCTGGTAAGCAGATTGCCGAAGAAATCCAGACGAGGCAGTACAGAGCTCCTGAAGTAATACTGCAGTCTGGTTATTCTTTCTCTGTCGACATGTGGTCTTTTGCTTGCACTGCTTTTGAGCTTGCCACTGGTGATATGATGTTTACCCCTAAAGGTGGACAAGGGTTTAGTGAAGATGAGGATCACCTTGCCATGATGATGGAACTCCTTGGAAAAATGCCACGGAAGGTTGCCATCTCTGGAGCACGGTCCAAGGATTACTTTGACAGACACGGGGATCTAAAGCGGATTCGGAGGCTAAAATTCTGGTCACTTGATAAATTGTTAATGGATCGGTACAAATTTTCAGAGAGTGATGCAAGGGAGTTGTCAGACTTCCTTGTACCTCTTCTTGATTTCACGCCAGAGAATCGACCAACTGCACAGCAGTGCTTACAACACCCATGGCTCAAAGACAAGGATTCTACATCTTCTCCAAATGAATCTAGTGTGGAAAAGGTTAATGTTGGCATGAGCAACCTTAAAATCAAGGTAGGAAAGTGA 1332 0.4467 MSCSSSSGSEEDDEGFESYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTRTSTYVALKIQKSAAQFAHAALHEIDVLSAIANGDPSNSKCVVHLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKCILIGLDYLHRELGILHTDLKPENILLFSSIDASKDPVRSGLSPILERPEGNPTSGVTSLIEKRLKRRARRAVAKISEKRASMGGTVEARKSDRNIDGIDVRCKIVDFGNACWAGKQIAEEIQTRQYRAPEVILQSGYSFSVDMWSFACTAFELATGDMMFTPKGGQGFSEDEDHLAMMMELLGKMPRKVAISGARSKDYFDRHGDLKRIRRLKFWSLDKLLMDRYKFSESDARELSDFLVPLLDFTPENRPTAQQCLQHPWLKDKDSTSSPNESSVEKVNVGMSNLKIKVGK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4031 443 SUPERFAMILY Protein kinase-like (PK-like) 32 422 IPR011009 -
Sto6g4031 443 PANTHER OS07G0472400 PROTEIN 7 420 - -
Sto6g4031 443 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Sto6g4031 443 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4031 443 CDD STKc_SRPK 27 413 - -
Sto6g4031 443 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Sto6g4031 443 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4031 443 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 420 - -
Sto6g4031 443 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Sto6g4031 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Sto6g4031 443 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g4031 443 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4031 Sto-Chr6 44043499 44047586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4031 4 425 EF-hand Containing Proteins AT5G22840 49.895 2.23e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Sto6g4031 Pkinase 7.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4031 K08832 - zju:107424333 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4031 6 44043499 44047586 Sto11g1407 11 13497526 13500303 CCT