Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4028 ATGGGAGGCTTATTACGCATTTTTGAGTTCAATCAGGGGAGCATGGCCAAGAAAGTTCATGCCCGCAAGAGACAACATCCTGGTGGCCTGGAAACTCCTCGAAACAGCCTGGAGCTGCAAGTAGAAGCATCTCAGATCCACTGTTTTTGGGAAATCACATCACATGTACTGGACTTGTACTATTCTCAAGCAGAAGACTTGTCAGAAAATAATTGTTATTCAGATGCGGCTTCAATGAAGAAGTTGATCAATGATGAGTTATCCAAAAGACCAAGCACCAAACAAAATGCCCCAAGCATTGTGGCAAGGTTGATGGGGATAGATATGATGCCATTAGACACTAAAACCGTACTTTCAtcagatgaaaaaaaaagtgaaaaaatggGGAAGAAATCTTCTGAGAAAGAAGTCAATGGAAGGGGTTCGGGTGGTAGGAGTTCCTCCAACACAAACTCATCTATCTATAGGGAATTTGACTCATGTCACCAACAcagggatgatgatgatgatggatggAACCAATATTTGGGGAATCCAAAGCCACGGGAACATCCTCAGGAAGAGGAATTGCAGAAATTCAAGAAAGAATTCGAAGCATTCCAAGCTGCAAGGTTAATGGAGTGTTCAAAGGTTGTTGAAGGTGGCAATATTTCTAGACGTTTGATTGCTCAAGAAAGCCTGAACAAGGAAAAAATGGAACATCATGCAAGTTCACAGAGACTGGCAACAGAGCTACCAAAAATAAGTGGATCAGATAATTGTCATGGTGATATGATGGAGTTATTCCCATCTAAACGTAAAGAATCCTTTCCTTCAAGGAGCAGAACCTTAAGTAGAGACTTTGAGGAGTCTTTAATGCTGAAATCTAAGAGTAGATTGGATAGATCTTCTTCGCCCACTCGGATAGTAATATTGAAACCTGGTCCTGATAGGATATACCACCATGATGAGAATTGGATTAGTTCATCAGGCACTTTACAAGGGAGAAATAGCATAGAAGATTTTCTTGAGGAGGTGAGAGAGCGGCTAAAATGTGAACTACATGGGAAAACTCTCAAAAAGGGTTCTGTGGTTCGAGGAAGTGGGATTGAGACACCTTACAATGAAAAGCCATCAGATCCTAAACAGATAGCTCGTCATATAGCAAAACAGGTCAGAGAAAGTGTGACCAGGGATGTTGGAGCAAACTTACTCCGCTCAGAATCAACAAGGTCATACAGAAGTGAAATTCAGTTCAATGGACCAAGTTCCCCAGAATTTATCAACAGAGATACCAGGAGATTCTTATCAGAGAGGCTAAGAAATGTTCTAAAAAGTGAAACTCATCTTGATATTCCTGAAGTGACTTGTGGGAACTCAAGGTCATATGTCTTGGAtgatcacatagttagattaaAACATGCAAGTTATAGTATGAACGCAAATGATTTGAGCCACTGGGAAATttcaaaagaggaaaaagaaatgcAAACAGGATCTTTCAGGCGTGAACCTGATGACAATATATTGCTTCCCAGGGAGTTGTCCCCTAGGAACCTTGTTAGATCCTTGTCCGCTCCTGTGTCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACCGCCACATTTTAACAGGAGCTCAAATTCGGAGGAAGCTTGAAGCCATTGAAACTGTATCtgttgatgttaaaaaaaagaagaaagatagatttaatattaaagaaaaagtttCCAATTTTAAATATAGTCTTGTCCTTAGAGGGAAGCTGTTTGGCAGAAAATTTCAGCCAATGTTAAAATCAAATGGTAATGAATATGGTCCCAAGGTGAGAGATGTCACAAGCGGACCAACAGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTATGCAGCAGTGCTCAGGAAGATAGTGACCAAGCTTGCTTATACATGATTTCATGGTGTCTTCCAATTTCTCTTGATATGTCAAATCATGCAGaaataagttTTTCTTCTTTAGTGGCCGTGGGTGGAAATTATAGTGAAGCCCGCCCATTTTTTAGACTGCTGATGAGGCCCGAGAGGATGGGAGGAATAAACATGAATGATCGAAATGGCGACGCCTCGGTGGCTCACGGCGGCGGCTCGGCAACGTCATTCATTTCCAGCACAAGCAAGAGAAGTATCAGATCCTTATCTTGCTTGAACTGTCTTTGGGTTGGTTACTTTGCTTCTTGGTTCACCAGGAGGTGGGAAACTTCGCTTATGAAGTACAAGAATAGATGTAAATTAATGGTCAATTTTTCAATAAGCAATGCCAAATATACTTATGTGCATGATCAGAAATACCCTTTGGAGGCTGTTGACATACACCATATAGTTGTTTTCTGTTTTAAATGCCTGCTTTTGGACATTGTTCTTGTCAAGCTGTTACTTTGGAAGCCTATTGCGAAAGGTAGGACCTATGGAGCTCTAAaagAATCAGTTGTCATTATGCCAGCTTTCGGAGTACAGCTTGAAACTCACTACAGGAGTGGAAAAGTCATCCGCTGCTTTGTTCCCATTGACAAGATTCTGAAACCTGTTCTGCTGGAATGCGTGACGCCAGTGACTTGTTACTGGACTCTGTCCTTGATTGTTCGTGGGGAATCAGAACTCGTGTTAATTTTCAAGTGCAGAAGTGACCCCGACCGGTAA 2661 0.398 MGGLLRIFEFNQGSMAKKVHARKRQHPGGLETPRNSLELQVEASQIHCFWEITSHVLDLYYSQAEDLSENNCYSDAASMKKLINDELSKRPSTKQNAPSIVARLMGIDMMPLDTKTVLSSDEKKSEKMGKKSSEKEVNGRGSGGRSSSNTNSSIYREFDSCHQHRDDDDDGWNQYLGNPKPREHPQEEELQKFKKEFEAFQAARLMECSKVVEGGNISRRLIAQESLNKEKMEHHASSQRLATELPKISGSDNCHGDMMELFPSKRKESFPSRSRTLSRDFEESLMLKSKSRLDRSSSPTRIVILKPGPDRIYHHDENWISSSGTLQGRNSIEDFLEEVRERLKCELHGKTLKKGSVVRGSGIETPYNEKPSDPKQIARHIAKQVRESVTRDVGANLLRSESTRSYRSEIQFNGPSSPEFINRDTRRFLSERLRNVLKSETHLDIPEVTCGNSRSYVLDDHIVRLKHASYSMNANDLSHWEISKEEKEMQTGSFRREPDDNILLPRELSPRNLVRSLSAPVSGTSFGKLLLEDRHILTGAQIRRKLEAIETVSVDVKKKKKDRFNIKEKVSNFKYSLVLRGKLFGRKFQPMLKSNGNEYGPKVRDVTSGPTENSTEVPPSPASVCSSAQEDSDQACLYMISWCLPISLDMSNHAEISFSSLVAVGGNYSEARPFFRLLMRPERMGGINMNDRNGDASVAHGGGSATSFISSTSKRSIRSLSCLNCLWVGYFASWFTRRWETSLMKYKNRCKLMVNFSISNAKYTYVHDQKYPLEAVDIHHIVVFCFKCLLLDIVLVKLLLWKPIAKGRTYGALKESVVIMPAFGVQLETHYRSGKVIRCFVPIDKILKPVLLECVTPVTCYWTLSLIVRGESELVLIFKCRSDPDR 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4028 886 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 641 - -
Sto6g4028 886 MobiDBLite consensus disorder prediction 595 626 - -
Sto6g4028 886 Pfam GPI-GlcNAc transferase complex, PIG-H component 816 879 IPR019328 -
Sto6g4028 886 MobiDBLite consensus disorder prediction 139 157 - -
Sto6g4028 886 MobiDBLite consensus disorder prediction 158 173 - -
Sto6g4028 886 MobiDBLite consensus disorder prediction 113 188 - -
Sto6g4028 886 Pfam DUF761-associated sequence motif 95 111 IPR032795 -
Sto6g4028 886 MobiDBLite consensus disorder prediction 607 626 - -
Sto6g4028 886 MobiDBLite consensus disorder prediction 117 138 - -
Sto6g4028 886 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4028 Sto-Chr6 44016714 44027184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4028 79 631 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.828 5.77e-90 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4028 - - gmx:100779720 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4028 6 44016714 44027184 Sto6g4028 6 44016714 44027184 ECH