Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4020 ATGGGTCTATGCTTTGGCTCTCTCGCTCACGATGATGGACCAAACTCTAGTGCCAATAAACATCCATATTCAGGTTCCGCAAGTACCGACAGTAAGAACGTTGGAATCTCTACTACGAACAGCAGTGCTGAAAGGAGCCaattttcagaaagagcaaGTGGGAGCTTTGCAGAGTCCCTTCCATCTCCCAATGGGCAAATTTTAGAAACGCCAAACTTGAAGGTTTTCAGTTTTGGGGACTTGAAAGCAGCCACAAAGAACTTCAGATCCGATACATTGCTTGGGGAAGGAGGTTTTGGTAAAGTGTACAAAGGTTGGTTGGATGAGAAGACTCTAACACCAGCTAAGGCAGGGTCAGGAATGGTGGTTgctattaaaaaattgaacccAGAAAGTATGCAGGGATTCCAGGAGTGGCAGTCAGAAGTCAATTTTTTAGGAAGGCTTTCTCACCCCCATTTGGTCAAGCTGTTGGGTTACTGTTGGGATGCTGAGGAGCTTCTTCTTGTGTATGAATTCATGGCAAAGGGGAGCTTGGAGAATCATCTGTTCAGAAGAAATCCTAACATTGAACCACTTTCTTGGAACATGCGACTCAAAATAGTTATTGGCGCAGCTCGGGGCCTGGCTTTCTTGCACACTTCAGAAAAGCAAGTGATATACAGAGATTTCAAGGCCTCAAATATACTACTTGATGGGAATTATAATGCAAAAATTTCTGATTTTGGCTTGGCAAAATTGGGGCCTGCCGGAGGAGAATCACATGTGACTACTAGGGTTATGGGCACTTACGGCTATGCTGCTCCAGAATACATTGCAACTGGTCACTTGTATGTAAAGAGTGATGTGTATGGCTTTGGTGTGGTGCTTCTTGAAATGCTGACGGGCTTGAGGGCACTTGATACAAAACGACCTAGTGGGCAGCATAATCTGGTTGAATGGGTGAAGCCATATCTCTCCAGTAAAAGAAGGTTGAAAACCGTTATGGATGCTAAGATTCAGGGTCAATATTCACTCAAGGCAGCATCACAAGCAGCTCAGCTTGCTTTAAAATGCTTACAACCTGAGCCTAAAAACCGTCCTTCCATGAAAGAAGTAGTTGAGGCATTGGAAGACATTGAAAGCATCAAGACAAAGTAA 1140 0.4307 MGLCFGSLAHDDGPNSSANKHPYSGSASTDSKNVGISTTNSSAERSQFSERASGSFAESLPSPNGQILETPNLKVFSFGDLKAATKNFRSDTLLGEGGFGKVYKGWLDEKTLTPAKAGSGMVVAIKKLNPESMQGFQEWQSEVNFLGRLSHPHLVKLLGYCWDAEELLLVYEFMAKGSLENHLFRRNPNIEPLSWNMRLKIVIGAARGLAFLHTSEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPSGQHNLVEWVKPYLSSKRRLKTVMDAKIQGQYSLKAASQAAQLALKCLQPEPKNRPSMKEVVEALEDIESIKTK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4020 379 Pfam Protein tyrosine and serine/threonine kinase 92 370 IPR001245 GO:0004672|GO:0006468
Sto6g4020 379 SUPERFAMILY Protein kinase-like (PK-like) 63 371 IPR011009 -
Sto6g4020 379 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Sto6g4020 379 PANTHER OS02G0670100 PROTEIN 15 376 - -
Sto6g4020 379 MobiDBLite consensus disorder prediction 12 65 - -
Sto6g4020 379 PANTHER OS01G0588500 PROTEIN-RELATED 15 376 - -
Sto6g4020 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Sto6g4020 379 MobiDBLite consensus disorder prediction 1 65 - -
Sto6g4020 379 Gene3D Transferase(Phosphotransferase) domain 1 174 379 - -
Sto6g4020 379 CDD STKc_IRAK 94 373 - -
Sto6g4020 379 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Sto6g4020 379 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4020 Sto-Chr6 43974309 43977222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4020 74 370 Glycoside Hydrolase AT3G07070 53.356 1.82e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto6g4020 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4020 - - gmx:100794193 607.446