Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4018 ATGGATTCCGGGCAGACCAGTTTGCTGACCACTCTCGTTGTCTTCCAGAACACCATTAAAGAAGAGTTGATCAGGAGCGTGCATGTCTACCGATTGAACGATGGGAGGGAAAGCGAAGTTGAAAGAGAGTTTGTATTTTCGCGGACTGGTTCATACGGGGAAATGCGGGCTACCCCAATTCTTAGATTACAGAAATTTAGTGTTTCTGAAGTTTCTGAAGGTTATCAGAATGGAGTGTGGCTTTGTGTCTTCGCTTTTCACGCCGATCATAAGCCTCAACATTTCCGCATTCCTTCATTTTTATCAGTCACGAGAAATCCCAAGCTTCAGACAATCCCAACATTGCTTAAGGATCTCCATGTGATATATAAGACGGAGTGCAAATCCAATGAGAGTGATCTCTCGCAAATCTCTCCAGACGAAAGAGGCCAAGGAACTGGAAATGATCACCATCCACCAAGAAAAATTTTGCTCCAGGATCTCAATTGTCTTCCGTATCCAGATGATATGCCTGTGTTACAAGACAACGAGCCAGATGATGAAAGTTTAGACATGTCTGAGTTACCTGAGAATGAGCCATATGACGAAATTTTAGACATGGCAGATTTACCACACAATGAACTTGTTGACGAAAGTTTACCAGGTATcacagagaagaaaaagagggCAGCCAGTAAAGATGTAGCAAGCATTGGTTTAGCAGATCTGATGAAGTACTTTGACGTGCCAATTGTAGAAGCATCAAAATGTCTAAAAGTTGGACTTACTGTACTCAAAAGAAAGTGCAGAGAATTTGGTATTCCTAGGTGGCCTCATAGGAAGATAAAATCACTTGACAATCTCATTCATGATCTTCAGGAAGTGGcagaaaatgaagaaatagaGAACAATGCTGCTGTAATGGCAGTGACAAAGAGGCAAAAGATGCTTGAGTgtgaaaaagaaattattgagAGGAAACCCTCCATCGACATACAAAGAGAAACCAAGAGATTCAGACAGGATGTCTTCAAGAGAAGGCATAGAGCTAGAGTTATGACAAGAGAGAGTTCTAGTGCCTCTAGCTCTTAG 1071 0.3996 MDSGQTSLLTTLVVFQNTIKEELIRSVHVYRLNDGRESEVEREFVFSRTGSYGEMRATPILRLQKFSVSEVSEGYQNGVWLCVFAFHADHKPQHFRIPSFLSVTRNPKLQTIPTLLKDLHVIYKTECKSNESDLSQISPDERGQGTGNDHHPPRKILLQDLNCLPYPDDMPVLQDNEPDDESLDMSELPENEPYDEILDMADLPHNELVDESLPGITEKKKRAASKDVASIGLADLMKYFDVPIVEASKCLKVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEVAENEEIENNAAVMAVTKRQKMLECEKEIIERKPSIDIQRETKRFRQDVFKRRHRARVMTRESSSASSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4018 356 Coils Coil 275 295 - -
Sto6g4018 356 ProSiteProfiles RWP-RK domain profile. 213 298 IPR003035 -
Sto6g4018 356 PANTHER PROTEIN RKD5 12 348 - -
Sto6g4018 356 PANTHER PROTEIN RKD4 12 348 IPR044607 GO:0003700
Sto6g4018 356 MobiDBLite consensus disorder prediction 130 154 - -
Sto6g4018 356 Pfam RWP-RK domain 231 278 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4018 Sto-Chr6 43967154 43971578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4018 19 356 AtRKD Transcription Factor Family AT4G35590 43.966 1.33e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Sto6g4018 RWP-RK 8.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4018 - - gmx:113001653 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4018 6 43967154 43971578 Sto6g4018 6 43967154 43971578 ECH