Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3986 ATGGGTATATCGCAGAAATGGTTGAAACTTGTTCGCAGAAGGTGCCTAGGCTCATCCCATAAAGATATTGTTATTCCTCGCACAAGCACTAGCACAAGTTGCTCAAATCAAAGTGAGAAAGCCATTCTTAGGAATGAAACAACCACATTTGAAGACCTTTGTTTGGCAGTCTTCTCCAGGAAAGATGTTGCAGCAATTAAGATCCAAGCTTGCTTCAGGGGTCATCTGGCAAGAAGGGCATATCGAGCTCTTAGAAGCTTGGTGAAGCTGCAAGCATTGGTTCGTGGGGTGTGCGTAAGGAGACAATCGCGCATTGCGCTGCACTGCATGCACGCACTTGTTCGCTTACAAGTCAGGGTTCGTGCAAGACAGCTTCTTGGCAGCTGTCATGACTCTTGA 399 0.4687 MGISQKWLKLVRRRCLGSSHKDIVIPRTSTSTSCSNQSEKAILRNETTTFEDLCLAVFSRKDVAAIKIQACFRGHLARRAYRALRSLVKLQALVRGVCVRRQSRIALHCMHALVRLQVRVRARQLLGSCHDS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3986 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 105 IPR027417 -
Sto6g3986 132 Gene3D - 59 108 - -
Sto6g3986 132 Pfam IQ calmodulin-binding motif 64 82 IPR000048 GO:0005515
Sto6g3986 132 PANTHER OS04G0561100 PROTEIN 4 128 - -
Sto6g3986 132 SMART iq_5 60 82 IPR000048 GO:0005515
Sto6g3986 132 SMART iq_5 83 104 IPR000048 GO:0005515
Sto6g3986 132 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
Sto6g3986 132 ProSiteProfiles IQ motif profile. 85 112 IPR000048 GO:0005515
Sto6g3986 132 PANTHER IQ-DOMAIN 5-RELATED 4 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3986 Sto-Chr6 43776002 43776481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3986 1 127 IQD Protein Family AT3G51380 53.543 1.41e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3986 - - cam:101507643 137.502