Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3985 ATGGCGATCGAGGAAGACATTGAGAGCTGTGGAAGCAGAGCCTATGTACAGTCACCGCAAGCTCATCCTCCTCAACACAGGAAGAAATTGGAGGTGTACAATGAGGTGCTTCGTCGAATTCAAGAGTTGGATTGTGAGGAGGCTAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTCAATGTGGAGAGGGCAGAAGATGTTCTCGCTCATAAGAGATTGCTGAAGTTGGCAGAGGACCCGGCTAATCGACCTGTATTTCAAGTTCGCTTAGTACAgGTATATCCTTATGGATGTTCAAATTTTGTTGACTCAATGCATTCAGATCCTTCTGAGAAAGAAGATGCCCAAAGTTCTTTTAACTATTCCTTTAAGCAGGGTAGAGTTCATCCACCGCCTACTTTTGGTTCATCGTCTAATCTTGAGGCTCTAGCCCGTCAaacaagtaaaaataattttgaagatGGGGACGGTGATATGGATGTGACACCATGCTTTAGCCGGTCACGGGATATCTTATTCCTAGTTAGCATTTCATGTCCCAGTAAAATTAGGCCCATGCATGAGATCACCTTTTCAACAGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTACTTGGTGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCATTGATGGGTTTTCTCTGGATGTCTTTGTTGTTGAGGGTTGGCCTAATGAGGAAACTGAGGAACTTAAACGTGTGTTGGAAAAGGAAATTTTGAAGTTTAAGCGGGAGCAACACCTGCCAAAACAGGCAATACCTTCTGCTGCCAATGAAGATTACCAGGCAAGGGTGGAACTCTTCCCTCATTGTGTAGAAATACCTTCTGATGGAACTGATGTATGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAGAGTTGGATCTGGGTCATTTGGTGATTTATACAGAGGTACATATTGTAGTCAAGATGTAGCTATCAAAGTCCTCAAGCCTGACCGAATAAATACAGAGATGTTGAGAGAGTTTGCCCAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTGCAGTTCATTGGTGCATGTACTCAACCACCAAATCTCTGCATTGTTACTGAGTTTATGTCCAGAGGAAGCGTATATGACTTTCTGCACAAACAAAGGGGTGAATTTAAGCTTCCATCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAACAATATAATTCACAGGGATCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGCGTTGCGAGAGTGCAAAGTCAATCTGGAGTGATGACTGCTGAAACTGGAACTTACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTGCCTTACTCTTACTTGTCCCCATTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGTCTACGACCATCGATCCCCAATAATGCACACCCTAGACTTTCTGAACTGCTCCAGCGGTGCTGGCAACAAGATCCCATTGAGAGACCAAATTTCTCTGAAATATTGGAACTTCTTCAGCAGATAGCAAAGGAGGTTACTGATGATCGACACAAGGAAAAATCATCTCATGGCTTTCTCTCAGCACTTAGACGGACCCATCACTAA 1782 0.4276 MAIEEDIESCGSRAYVQSPQAHPPQHRKKLEVYNEVLRRIQELDCEEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPANRPVFQVRLVQVYPYGCSNFVDSMHSDPSEKEDAQSSFNYSFKQGRVHPPPTFGSSSNLEALARQTSKNNFEDGDGDMDVTPCFSRSRDILFLVSISCPSKIRPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTIDGFSLDVFVVEGWPNEETEELKRVLEKEILKFKREQHLPKQAIPSAANEDYQARVELFPHCVEIPSDGTDVWEIDTNQLKFENRVGSGSFGDLYRGTYCSQDVAIKVLKPDRINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGEFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQSQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLSPLQAAVGVVQKGLRPSIPNNAHPRLSELLQRCWQQDPIERPNFSEILELLQQIAKEVTDDRHKEKSSHGFLSALRRTHH 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3985 593 PRINTS Tyrosine kinase catalytic domain signature 389 402 IPR001245 GO:0004672|GO:0006468
Sto6g3985 593 PRINTS Tyrosine kinase catalytic domain signature 426 444 IPR001245 GO:0004672|GO:0006468
Sto6g3985 593 PRINTS Tyrosine kinase catalytic domain signature 472 482 IPR001245 GO:0004672|GO:0006468
Sto6g3985 593 PRINTS Tyrosine kinase catalytic domain signature 491 513 IPR001245 GO:0004672|GO:0006468
Sto6g3985 593 PRINTS Tyrosine kinase catalytic domain signature 535 557 IPR001245 GO:0004672|GO:0006468
Sto6g3985 593 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 20 581 - -
Sto6g3985 593 ProSitePatterns Protein kinases ATP-binding region signature. 321 342 IPR017441 GO:0005524
Sto6g3985 593 SMART serkin_6 315 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3985 593 Pfam Protein tyrosine and serine/threonine kinase 315 564 IPR001245 GO:0004672|GO:0006468
Sto6g3985 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Sto6g3985 593 CDD STKc_MAP3K-like 321 564 - -
Sto6g3985 593 Gene3D Phosphorylase Kinase; domain 1 304 393 - -
Sto6g3985 593 Gene3D Transferase(Phosphotransferase) domain 1 394 590 - -
Sto6g3985 593 ProSiteProfiles ACT domain profile. 201 280 IPR002912 -
Sto6g3985 593 SUPERFAMILY ACT-like 199 265 IPR045865 -
Sto6g3985 593 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 581 - -
Sto6g3985 593 Coils Coil 251 271 - -
Sto6g3985 593 CDD ACT_TyrKc 199 266 - -
Sto6g3985 593 MobiDBLite consensus disorder prediction 572 593 - -
Sto6g3985 593 ProSiteProfiles Protein kinase domain profile. 315 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3985 593 SUPERFAMILY Protein kinase-like (PK-like) 297 564 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3985 Sto-Chr6 43764847 43775157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3985 1 592 MAP Kinase Kinase Kinase AT4G35780 68.908 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto6g3985 PK_Tyr_Ser-Thr 6.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3985 - - gmx:100816767 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1546 11 14635819 14636604 Sto6g3985 6 43764847 43775157 CCT