Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3932 TTGCAATCCCTGTCAATTCCGCCATCTCTCTCCACCACCACTTTCTCCACCCAATCCGTCTCTTCTCCGCCGTACCAACAGAAATCAAGGCCTTCTTCGTCTCTGAGCTCTCATACTATGTCGTCATCGTGCACCACGTCGCTGTACGAGATTCTAGGGATTCCATCCCGCGCTTCCAATCAAGAAATTAAGGCAGCGTACCGGAGATTAGCGAGAGTGTGCCATCCTGATGTGGCGACGGTGGATCGGAAGAACTCGTCGGCGGTTGAGTTCATGAAGATTCACGCCGCGTACTCCACTCTGTCGGACCCGGAGAAGCGTGCGACCTACGATCGAAGCCTTTGCCGGCGACAAAGGCCGTTGTCGACGGCGTCATCGTATTCCGGTTACAGTGGCCGGAACTGGGAAACGGACCAGTGCTGGTAG 426 0.554 LQSLSIPPSLSTTTFSTQSVSSPPYQQKSRPSSSLSSHTMSSSCTTSLYEILGIPSRASNQEIKAAYRRLARVCHPDVATVDRKNSSAVEFMKIHAAYSTLSDPEKRATYDRSLCRRQRPLSTASSYSGYSGRNWETDQCW 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3932 141 Gene3D DnaJ domain 33 133 IPR036869 -
Sto6g3932 141 MobiDBLite consensus disorder prediction 1 41 - -
Sto6g3932 141 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 14 141 - -
Sto6g3932 141 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 14 141 - -
Sto6g3932 141 SMART dnaj_3 46 106 IPR001623 -
Sto6g3932 141 CDD DnaJ 49 103 IPR001623 -
Sto6g3932 141 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Sto6g3932 141 PRINTS DnaJ domain signature 86 106 IPR001623 -
Sto6g3932 141 PRINTS DnaJ domain signature 49 67 IPR001623 -
Sto6g3932 141 PRINTS DnaJ domain signature 67 82 IPR001623 -
Sto6g3932 141 ProSiteProfiles dnaJ domain profile. 47 114 IPR001623 -
Sto6g3932 141 SUPERFAMILY Chaperone J-domain 45 117 IPR036869 -
Sto6g3932 141 Pfam DnaJ domain 48 111 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3932 Sto-Chr6 43455794 43456297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3932 49 111 C2H2 Transcription Factor Family AT1G74250 43.284 2.21e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3932 6 43455794 43456297 Sto6g3932 6 43455794 43456297 ECH
Sto6g3932 6 43455794 43456297 Sto11g1480 11 14051351 14051653 ECH
Sto10g0084 10 650753 651085 Sto6g3932 6 43455794 43456297 ECH