Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3930 ATGGGAATCTGCTTCTCTTCCACAAAGGTAAGTGGCTCAAATAGCAATACCGGCGCCACCACCGCTAACCAAAATCGCAAAGAAAGCTCGAAGCCTCATTCACGCAAGAAGGCGGTCAAATCtcaagcctccaaaaatcaacGCTCCAAAGAACCCAATGACACCCACAAAACTCACCCCAAGAAGATTTCCCAGCACCATCAGCCCAAGGACAAGCAAAATTCCAGGCGCCAACCATGCGGGAAGCGCACCGATTTCGGCTATGACAAAAATTTTGATTACTGCTACTCGCTTGGAAAATTGTTAGGACACGGTCAATTTGGTTACACATATGTTGGAATAGATAAAGCCAATGGGGATCGGGTGGCGGTGAAGCGAATTGACAAGAGCAAGATGATTCTCCCTATTGCTGTTGAGGATGTTAAACGAGAGGTCAAGATATTAAAAGAACTCACAGGCCATGAGAACGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTATACATAGTTATGGAGTTATGCGAGGGTGGGGAGCTGTTAGATCGGATTTTGGCCAAGAAGGACAGCCGTTATACTGAAAAAGATGCAGCAGTGGTAGTAAGGCAGATGCTCAAAGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACACCGAGACATGAAACCAGAGaACTTTCTTTTCAAATCAACCAAAGAAGATTCACCTTTAAAAGCAACAGATTTTGGTTTGTCAGATTTTATTAAACCTGGAAAGAAGTTTCATGATATTGTTGGCAGTGCTTACTATGTTGCGCCTGAAGTGTTGAAGCGCAAGTCAGGTCCTGAATCAGATGTATGGAGTATTGGTGTAATTACATACATATTGCTTAGTGGGAGGCGCCCATTTTGGGATAAAACTGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCTGATTTTCGGCGAAAACCATGGCCATCTATTAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGCTAGTAAAAGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTCTGTCTCATCAATGGGTTAGAGAAGGAGGAGAGGCATTAGAGATTCCTATTGATATATCTGTCTTAAGCAACATGCGGCAGTTTGTGAAATTTAGTAGATTGAAACAATTTGCACTTAGGGCACTGGCCAGCACGCTTAATGAAGAAGAATTAGCTGATCTCAGAGATCAATTTGATGCAATAGATGTGGACAAAAGTGGTGCTATTAGTCTAGAAGAGATGAGACAGGCTCTTGCTAAGGATATACCTTGGAAGTTAAAAGATTCCCGTGTTCTTGAGATTTTGCAAGCAATAGACTGCAACACAGATGGGCTTGTGGATTTCTCAGAGTTTGTGGCTGCTACATTACACGTGCATCAGATGGAGGAACATGATTCGGAGAGGTGGCAGCACCGGTCCCAAGCGGcttttgagaaatttgatatAGATAAGGATGGCTATATTACTCCGGAAGAGCTTAGAATGCATACGGGCTTACGGGGTTCCATCGATCCGCTGCTTGAGGAAGCCGATATTGATAAAGATGGAAAGATCAGCTTACAAGAATTCCGTAGACTTTTAAGAACTGCAAGCATTAGTTCACGAAATAGTTTGCTCAATCCCTTGCGATTTTCTATTGTGGAGAACGGAGATTCTGCTCAAGCCTTCATATCTATGAGAGACTCTGTACACGAAGCTACCCTAGAAGACTACGTCCTGATGAGGATTCCTGCATGGAATTTAGAAGGTTTCATAATGCATCTTAAGTTCAAGCTCCGTAGCCACGTCGTTAGACTCCCCACATCTTTCTGGCCAGGCATCTTAACATACTGGGCGGTTGGCTGCTCGAGTGGGGGATTAACAGGAGCAGAGAAGGGGACAAATGTGGAACAAGGATTGGGAATTGGACCTTGA 1944 0.43 MGICFSSTKVSGSNSNTGATTANQNRKESSKPHSRKKAVKSQASKNQRSKEPNDTHKTHPKKISQHHQPKDKQNSRRQPCGKRTDFGYDKNFDYCYSLGKLLGHGQFGYTYVGIDKANGDRVAVKRIDKSKMILPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLSGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNAAKDFVKKLLVKDPRARLTAAQALSHQWVREGGEALEIPIDISVLSNMRQFVKFSRLKQFALRALASTLNEEELADLRDQFDAIDVDKSGAISLEEMRQALAKDIPWKLKDSRVLEILQAIDCNTDGLVDFSEFVAATLHVHQMEEHDSERWQHRSQAAFEKFDIDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLQEFRRLLRTASISSRNSLLNPLRFSIVENGDSAQAFISMRDSVHEATLEDYVLMRIPAWNLEGFIMHLKFKLRSHVVRLPTSFWPGILTYWAVGCSSGGLTGAEKGTNVEQGLGIGP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3930 647 Gene3D - 382 536 - -
Sto6g3930 647 Gene3D Transferase(Phosphotransferase) domain 1 182 374 - -
Sto6g3930 647 SMART serkin_6 96 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3930 647 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 547 - -
Sto6g3930 647 MobiDBLite consensus disorder prediction 1 82 - -
Sto6g3930 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Sto6g3930 647 SUPERFAMILY Protein kinase-like (PK-like) 96 357 IPR011009 -
Sto6g3930 647 MobiDBLite consensus disorder prediction 1 27 - -
Sto6g3930 647 ProSiteProfiles EF-hand calcium-binding domain profile. 516 543 IPR002048 GO:0005509
Sto6g3930 647 ProSitePatterns EF-hand calcium-binding domain. 412 424 IPR018247 -
Sto6g3930 647 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Sto6g3930 647 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 16 36 547 - -
Sto6g3930 647 ProSiteProfiles Protein kinase domain profile. 96 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3930 647 ProSiteProfiles EF-hand calcium-binding domain profile. 399 434 IPR002048 GO:0005509
Sto6g3930 647 MobiDBLite consensus disorder prediction 67 82 - -
Sto6g3930 647 Gene3D - 375 466 - -
Sto6g3930 647 SUPERFAMILY EF-hand 388 540 IPR011992 -
Sto6g3930 647 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Sto6g3930 647 Pfam EF-hand domain pair 403 465 IPR002048 GO:0005509
Sto6g3930 647 Pfam EF-hand domain pair 485 537 IPR002048 GO:0005509
Sto6g3930 647 CDD EFh 484 538 IPR002048 GO:0005509
Sto6g3930 647 SMART efh_1 482 510 IPR002048 GO:0005509
Sto6g3930 647 SMART efh_1 403 431 IPR002048 GO:0005509
Sto6g3930 647 SMART efh_1 512 540 IPR002048 GO:0005509
Sto6g3930 647 SMART efh_1 440 468 IPR002048 GO:0005509
Sto6g3930 647 ProSiteProfiles EF-hand calcium-binding domain profile. 478 513 IPR002048 GO:0005509
Sto6g3930 647 CDD STKc_CAMK 96 355 - -
Sto6g3930 647 Gene3D Phosphorylase Kinase; domain 1 90 181 - -
Sto6g3930 647 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Sto6g3930 647 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Sto6g3930 647 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Sto6g3930 647 Pfam Protein kinase domain 96 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3930 Sto-Chr6 43439578 43445413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3930 1 546 EF-hand Containing Proteins AT2G17890 76.408 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto6g3930 Pkinase 9.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3930 K13412 - csv:101222854 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3930 6 43439578 43445413 Sto6g3930 6 43439578 43445413 ECH