Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3926 ATGTGCAGGCAAAGCAGTACAAGATGGACACCCACAAGTGACCAGATAAGGATACTGAAGGAGCTTTACTACAACAATGGAGTTCGTTCCCCAAATGCAGAGCAGATTCAGAAGATCTCTGCTAGGCTTAGGCAGTACGGCAAGATTGAAGGTAAGAATGTGTTTTACTGGTTTCAAAACCACAAGGCTCGCGAACGCCAGAAGAAACGTTTCactacttctacttctacctcTACTGATCATCATCTCATCCCCATCCAAGCCCCCTCTTCTATTCCTCCACCTCCTTCCCCTTCCCCTTCCCCTTGGAAGCCACctgatcatcatcttcatcttcatcaccCCACCTATTCTCACTCTATTCATCCTTCTTCTGCACCTCCAGCTGGAGGTAACAGTGGATGGGTTGGAGTGGATCCATATGCCTCCAACTACACTAATTTCTTGGACAAAATAAGGCCAAATGATCAATTTGAAAGCctcaaagaagaagatgaagaagaagaagatggtgcCCCTGAGATTGAAACCCTGCCTCTGTTCCCTATGCATGCTGAGGACATCCATGCCCATGCCTTCTGCAACCTCAATAAGTCTGATTCTTCTTACTATGCCCCTCCCTACTATCGCACTCATCCTCATCATTATCGTACTTCCCTCGAGCTTACTCTCAACTCCTACACCCCCACTTCTCCGGATTCAACTTAA 708 0.4195 MCRQSSTRWTPTSDQIRILKELYYNNGVRSPNAEQIQKISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTSTSTSTDHHLIPIQAPSSIPPPPSPSPSPWKPPDHHLHLHHPTYSHSIHPSSAPPAGGNSGWVGVDPYASNYTNFLDKIRPNDQFESLKEEDEEEEDGAPEIETLPLFPMHAEDIHAHAFCNLNKSDSSYYAPPYYRTHPHHYRTSLELTLNSYTPTSPDST 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3926 235 ProSiteProfiles 'Homeobox' domain profile. 2 68 IPR001356 GO:0003677
Sto6g3926 235 SUPERFAMILY Homeodomain-like 7 71 IPR009057 -
Sto6g3926 235 CDD homeodomain 7 69 IPR001356 GO:0003677
Sto6g3926 235 PANTHER PROTEIN WUSCHEL 131 229 - -
Sto6g3926 235 PANTHER PROTEIN WUSCHEL 1 120 - -
Sto6g3926 235 Pfam Homeodomain 6 67 IPR001356 GO:0003677
Sto6g3926 235 MobiDBLite consensus disorder prediction 88 105 - -
Sto6g3926 235 MobiDBLite consensus disorder prediction 66 131 - -
Sto6g3926 235 SMART HOX_1 4 72 IPR001356 GO:0003677
Sto6g3926 235 Gene3D - 6 72 - -
Sto6g3926 235 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 120 IPR044555 GO:0003700|GO:0099402
Sto6g3926 235 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 131 229 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3926 Sto-Chr6 43416425 43417784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3926 2 187 Wox Gene Family AT2G17950 43.348 2.05e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto6g3926 Homeodomain 6.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3926 - - gmx:100803815 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3926 6 43416425 43417784 Sto6g3926 6 43416425 43417784 ECH