Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3915 ATGGCTTCCGGCGGAGAAGGTGATACTCCCATGGTTGAGCAACCTGTAGAAGAACCTAAGGCAGtggtgaaggagaagaagcccaAGGCTCCTAAAGAGAAGAAGCCCAAAACGGCTTCTCATCCTCCATATTTTCAGATGATTAAGGAAGCCCTAGTGGGCCTGAACGAGAAGGGTGGGTCCAGCCCATACGCCATAGCGAAATATATGGAAGATAAACATAAGTCGGTTCTGCCTGGGAATTTCAGGAAGATCTTGGCTCTTCAGCTGAAGAACCAAGCTGCGAGAGGGACGCTGATAAAGATTAAGGCTTCGTACAAGTTATCTTCTTCTGAAGGTGGGAAGAAGGAGAGTATTAGGGTGAGTCGGAGGAGTACAAGGGCACAGAAAGCTAAAGCAACGAAGAAAACAGAGGGGGCGAAGAAAGTTGGAGTGAAGAAGACGAGGAAGTCGTCCTCAGCTGCTAAGCCCAAGCAGCCCAAGTCTATTAGGACTCCTTCCAAGAGGGCCAGAAAAGCCACTGCCTCAGCTTCCTGA 537 0.4749 MASGGEGDTPMVEQPVEEPKAVVKEKKPKAPKEKKPKTASHPPYFQMIKEALVGLNEKGGSSPYAIAKYMEDKHKSVLPGNFRKILALQLKNQAARGTLIKIKASYKLSSSEGGKKESIRVSRRSTRAQKAKATKKTEGAKKVGVKKTRKSSSAAKPKQPKSIRTPSKRARKATASAS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3915 178 MobiDBLite consensus disorder prediction 131 145 - -
Sto6g3915 178 MobiDBLite consensus disorder prediction 105 178 - -
Sto6g3915 178 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 40 110 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto6g3915 178 PANTHER HISTONE H1 16 174 - -
Sto6g3915 178 PRINTS Histone H5 signature 27 48 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto6g3915 178 PRINTS Histone H5 signature 54 71 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto6g3915 178 PRINTS Histone H5 signature 129 143 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto6g3915 178 PRINTS Histone H5 signature 161 178 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto6g3915 178 SMART h15plus2 38 105 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto6g3915 178 MobiDBLite consensus disorder prediction 1 43 - -
Sto6g3915 178 Pfam linker histone H1 and H5 family 41 107 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto6g3915 178 PANTHER HISTONE H1 16 174 - -
Sto6g3915 178 SUPERFAMILY "Winged helix" DNA-binding domain 37 113 IPR036390 -
Sto6g3915 178 CDD H15 38 116 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto6g3915 178 Gene3D - 34 113 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3915 Sto-Chr6 43339635 43340262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3915 31 115 Single Myb Histone (SMH) Gene Family AT1G72740 36.782 9.36e-08 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3915 6 43339635 43340262 Sto6g3915 6 43339635 43340262 ECH